RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 ENPP3O14638 875 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 HOXA2O43364 376 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 ERBB2P04626 1255 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 CXCR5P32302 372 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 CLCNKBP51801 687 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 GOLGA7BQ2TAP0 167 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 TEX35Q5T0J7 233 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 GLB1LQ6UWU2 654 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 ACOT1Q86TX2 421 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 RHOT1Q8IXI2 618 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 URGCPQ8TCY9 931 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 IPO4Q8TEX9 1081 aaKnown RBP11.74□□□□□ -0.53
PDPN-202ENST00000376057 MAIP1Q8WWC4 291 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 ALG3Q92685 438 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 RUNDC3BQ96NL0 473 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 GOLPH3Q9H4A6 298 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 SLITRK6Q9H5Y7 841 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 GOLGA2P5Q9HBQ8 144 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 RNF19AQ9NV58 838 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 ARGLU1Q9NWB6 273 aaPredicted RBP11.74□□□□□ -0.53
PDPN-202ENST00000376057 HESX1Q9UBX0 185 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 CCDC151A5D8V7 595 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 SPOPO43791 374 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 TFRCP02786 760 aaKnown RBP11.74□□□□□ -0.53
PDPN-202ENST00000376057 ODC1P11926 461 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 COPS2P61201 443 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 NAA30Q147X3 362 aaPredicted RBP11.74□□□□□ -0.53
PDPN-202ENST00000376057 TTC30AQ86WT1 665 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 SUSD3Q96L08 255 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
PDPN-202ENST00000376057 PARD6BQ9BYG5 372 aa11.74□□□□□ -0.53
PDPN-202ENST00000376057 DCDC2CA8MYV0 355 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 ATP8B1O43520 1251 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 CEP104O60308 925 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 KRT3P12035 628 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 CYP1B1Q16678 543 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 NOMO2Q5JPE7 1267 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 OSTM1Q86WC4 334 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 EXD1Q8NHP7 514 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.73□□□□□ -0.53
PDPN-202ENST00000376057 MS4A14Q96JA4 679 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 ACBD6Q9BR61 282 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 FSCN2O14926 492 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 XPO1O14980 1071 aaKnown RBP11.73□□□□□ -0.53
PDPN-202ENST00000376057 PTPN1P18031 435 aaKnown RBP11.73□□□□□ -0.53
PDPN-202ENST00000376057 PCSK1P29120 753 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 GJA8P48165 433 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 PSMC1P62191 440 aaKnown RBP11.73□□□□□ -0.53
PDPN-202ENST00000376057 CLLU1OSQ5K130 101 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 COLGALT2Q8IYK4 626 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 SCML4Q8N228 414 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 C12orf50Q8NA57 414 aaPredicted RBP11.73□□□□□ -0.53
PDPN-202ENST00000376057 DUSP16Q9BY84 665 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 ASNSD1Q9NWL6 643 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 DDX56Q9NY93 547 aaKnown RBP11.73□□□□□ -0.53
PDPN-202ENST00000376057 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 EFR3BQ9Y2G0 817 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 LTBP2Q14767 1821 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 LMO2P25791 158 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 PCK1P35558 622 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 AFF1P51825 1210 aaKnown RBP11.73□□□□□ -0.53
PDPN-202ENST00000376057 PDE4CQ08493 712 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 ZNF252P-AS1Q0IIN9 211 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 FAAP100Q0VG06 881 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 SEL1L2Q5TEA6 688 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 FAM171BQ6P995 826 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 C12orf29Q8N999 325 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 KRT35Q92764 455 aa11.73□□□□□ -0.53
PDPN-202ENST00000376057 RBM12Q9NTZ6 932 aaKnown RBP11.73□□□□□ -0.53
PDPN-202ENST00000376057 WSCD1Q658N2 575 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 METTL23Q86XA0 190 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 VSIG1Q86XK7 387 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 RCOR2Q8IZ40 523 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 C3orf58Q8NDZ4 430 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 BTBD6Q96KE9 485 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 PKMYT1Q99640 499 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 TMEM175Q9BSA9 504 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 DPEP3Q9H4B8 488 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 PATJQ8NI35 1801 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 HSPA8P11142 646 aaKnown RBP11.72□□□□□ -0.53
PDPN-202ENST00000376057 ZNF143P52747 638 aaPredicted RBP11.72□□□□□ -0.53
PDPN-202ENST00000376057 C1QTNF8P60827 252 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 RPL7AP62424 266 aaKnown RBP11.72□□□□□ -0.53
PDPN-202ENST00000376057 SLC6A3Q01959 620 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 C2orf54Q08AI8 447 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 ORC1Q13415 861 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 DCUN1D2Q6PH85 259 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 OLFML1Q6UWY5 402 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 DSTYKQ6XUX3 929 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 MYCBPAPQ8TBZ2 947 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 TSC1Q92574 1164 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 MCEEQ96PE7 176 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 PSMB7Q99436 277 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
PDPN-202ENST00000376057 CSNK1G1Q9HCP0 422 aa11.72□□□□□ -0.53
PDPN-202ENST00000376057 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDPN-202ENST00000376057 TBX21Q9UL17 535 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms