RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CHN1P15882 459 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 NFX1Q12986 1120 aaKnown RBP14.73□□□□□ -0.05
MSH5-202ENST00000375740 ORC1Q13415 861 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 ZFYVE27Q5T4F4 411 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 HOOK3Q86VS8 718 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
MSH5-202ENST00000375740 LRRC34Q8IZ02 419 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 RCOR2Q8IZ40 523 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 TLCD1Q96CP7 247 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 SNF8Q96H20 258 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 BCO2Q9BYV7 579 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 FAM129AQ9BZQ8 928 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 YIPF3Q9GZM5 350 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 KATNBL1Q9H079 304 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 IVNS1ABPQ9Y6Y0 642 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 PLXNB2O15031 1838 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 RIPK2O43353 540 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 GAS8O95995 478 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 CETPP11597 493 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 ARF4P18085 180 aaPredicted RBP14.73□□□□□ -0.05
MSH5-202ENST00000375740 RAD23BP54727 409 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 TNFAIP2Q03169 654 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 ADCY2Q08462 1091 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 SLC10A6Q3KNW5 377 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 RHBDF2Q6PJF5 856 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 MTHFD1LQ6UB35 978 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 FAM167BQ9BTA0 163 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 AAASQ9NRG9 546 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 NEU2Q9Y3R4 380 aa14.73□□□□□ -0.05
MSH5-202ENST00000375740 CCL15-CCL14A0A0B4J2E2 113 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 H3BRB1 525 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 STRNO43815 780 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 CALRP27797 417 aaKnown RBP14.72□□□□□ -0.05
MSH5-202ENST00000375740 ADCY8P40145 1251 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 VPS41P49754 854 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 ITGA8P53708 1063 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 CCL15Q16663 113 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 KAZNQ674X7 775 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 TXNRD3NBQ6F5E7 133 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 TUT1Q9H6E5 874 aaKnown RBP14.72□□□□□ -0.05
MSH5-202ENST00000375740 TJP2Q9UDY2 1190 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 CYTH4Q9UIA0 394 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 SMIM23A6NLE4 172 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 GOLGA8SH3BPF8 625 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 MED7O43513 233 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 CHKAP35790 457 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 CETN2P41208 172 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 ABL2P42684 1182 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 MAP1SQ66K74 1059 aaPredicted RBP14.72□□□□□ -0.05
MSH5-202ENST00000375740 MFSD7Q6UXD7 560 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 KIF2BQ8N4N8 673 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 CXorf38Q8TB03 319 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 NLRP7Q8WX94 980 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 EMID1Q96A84 441 aaPredicted RBP14.72□□□□□ -0.05
MSH5-202ENST00000375740 SLITRK1Q96PX8 696 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 TWNKQ96RR1 684 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 SMYD3Q9H7B4 428 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 BATF3Q9NR55 127 aa14.72□□□□□ -0.05
MSH5-202ENST00000375740 KRT1P04264 644 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 ATF2P15336 505 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 TAP1Q03518 808 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 PIGHQ14442 188 aaPredicted RBP14.71□□□□□ -0.05
MSH5-202ENST00000375740 PTPN20Q4JDL3 420 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 PIGWQ7Z7B1 504 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 DPP9Q86TI2 863 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 BRI3BPQ8WY22 251 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 P3H4Q92791 437 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 ACSF2Q96CM8 615 aaPredicted RBP14.71□□□□□ -0.05
MSH5-202ENST00000375740 PGM2Q96G03 612 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 RBM41Q96IZ5 413 aaKnown RBP14.71□□□□□ -0.05
MSH5-202ENST00000375740 LHX5Q9H2C1 402 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 ADAM7Q9H2U9 754 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 SLC5A4Q9NY91 659 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 ANAPC5Q9UJX4 755 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 SRCAPQ6ZRS2 3230 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 RFC1P35251 1148 aaPredicted RBP14.71□□□□□ -0.05
MSH5-202ENST00000375740 RIPK1Q13546 671 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 ZNF268Q14587 947 aaPredicted RBP14.71□□□□□ -0.05
MSH5-202ENST00000375740 LRRC38Q5VT99 294 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 PRUNE1Q86TP1 453 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 TAX1BP1Q86VP1 789 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 SLC4A11Q8NBS3 891 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 SELENOSQ9BQE4 189 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 DDX23Q9BUQ8 820 aaKnown RBP14.71□□□□□ -0.05
MSH5-202ENST00000375740 ELOVL4Q9GZR5 314 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 CDC42EP4Q9H3Q1 356 aaKnown RBP14.71□□□□□ -0.05
MSH5-202ENST00000375740 ASB7Q9H672 318 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 HMGXB4Q9UGU5 601 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 COL1A2P08123 1366 aa14.71□□□□□ -0.05
MSH5-202ENST00000375740 UBOX5O94941 541 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 LINGO3P0C6S8 592 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 SMPD1P17405 629 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 ATF7P17544 494 aaPredicted RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 POLR2BP30876 1174 aaKnown RBP14.7□□□□□ -0.06
MSH5-202ENST00000375740 GTF2A2P52657 109 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 MARCH8Q5T0T0 291 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 C6orf118Q5T5N4 469 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 SPOCD1Q6ZMY3 1216 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 ZNF365Q70YC5 407 aa14.7□□□□□ -0.06
MSH5-202ENST00000375740 ILDR2Q71H61 639 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms