RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 TDRD3Q9H7E2 651 aaKnown RBP20.57■□□□□ 0.88
COL15A1-201ENST00000375001 PLEKHA5Q9HAU0 1116 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 RAVER2Q9HCJ3 691 aaKnown RBP20.57■□□□□ 0.88
COL15A1-201ENST00000375001 PTPN7P35236 360 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 PHKA2P46019 1235 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 RASA2Q15283 850 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 TMED8Q6PL24 325 aaPredicted RBP20.57■□□□□ 0.88
COL15A1-201ENST00000375001 RDM1Q8NG50 284 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 PPP2R3CQ969Q6 453 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 ATAD3AQ9NVI7 634 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 DUSP10Q9Y6W6 482 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 EYA4O95677 639 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 TMEM253P0C7T8 217 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 AQP5P55064 265 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 MMRN1Q13201 1228 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 KBTBD12Q3ZCT8 623 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 STK39Q9UEW8 545 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 CHORDC1Q9UHD1 332 aaPredicted RBP20.57■□□□□ 0.88
COL15A1-201ENST00000375001 KLHL20Q9Y2M5 609 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 SLC16A3O15427 465 aaKnown RBP20.57■□□□□ 0.88
COL15A1-201ENST00000375001 NDUFS3O75489 264 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 FMO5P49326 533 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 ANKRD27Q96NW4 1050 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 RXFP1Q9HBX9 757 aa20.57■□□□□ 0.88
COL15A1-201ENST00000375001 A0A1W2PQJ5 194 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 CFAP99D6REC4 459 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 CST8O60676 142 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 PSMB9P28065 219 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 NDUFA5Q16718 116 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 DUOXA2Q1HG44 320 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 LRRC8DQ7L1W4 858 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 TRAPPC11Q7Z392 1133 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 PPIL6Q8IXY8 311 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 RSPH1Q8WYR4 309 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 TMEM120AQ9BXJ8 343 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 SMAPO00193 183 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 TBC1D12O60347 775 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 TRIM13O60858 407 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 KLHL18O94889 574 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 ATP6V1B2P21281 511 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 RFX5P48382 616 aaPredicted RBP20.56■□□□□ 0.88
COL15A1-201ENST00000375001 PPP3CCP48454 512 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 SERPINH1P50454 418 aaKnown RBP20.56■□□□□ 0.88
COL15A1-201ENST00000375001 VPS33BQ9H267 617 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 POLIQ9UNA4 740 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 RBP3P10745 1247 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 C6orf62Q9GZU0 229 aaPredicted RBP20.56■□□□□ 0.88
COL15A1-201ENST00000375001 SULT1E1P49888 294 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 CENPCQ03188 943 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 SLC34A1Q06495 639 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 RC3H1Q5TC82 1133 aaKnown RBP20.56■□□□□ 0.88
COL15A1-201ENST00000375001 REEP2Q9BRK0 252 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 CLEC4MQ9H2X3 399 aaPredicted RBP20.56■□□□□ 0.88
COL15A1-201ENST00000375001 GABBR1Q9UBS5 961 aa20.56■□□□□ 0.88
COL15A1-201ENST00000375001 PARNO95453 639 aaKnown RBP20.55■□□□□ 0.88
COL15A1-201ENST00000375001 SWSAP1Q6NVH7 229 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 FAM71DQ8N9W8 422 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 PXDNLA1KZ92 1463 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 KRT76Q01546 638 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 ZFP42Q96MM3 310 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 FANCEQ9HB96 536 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 NUP62P37198 522 aaPredicted RBP20.55■□□□□ 0.88
COL15A1-201ENST00000375001 RGS7P49802 495 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 PIGHQ14442 188 aaPredicted RBP20.55■□□□□ 0.88
COL15A1-201ENST00000375001 GHRP10912 638 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 SOAT1P35610 550 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 MAPK7Q13164 816 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 TRMT5Q32P41 509 aaKnown RBP20.55■□□□□ 0.88
COL15A1-201ENST00000375001 WDR60Q8WVS4 1066 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 SH2D3AQ9BRG2 576 aa20.55■□□□□ 0.88
COL15A1-201ENST00000375001 PSTPIP1O43586 416 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 RALAP11233 206 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 CCT3P49368 545 aaKnown RBP20.54■□□□□ 0.88
COL15A1-201ENST00000375001 CDK17Q00537 523 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 CACNB2Q08289 660 aaPredicted RBP20.54■□□□□ 0.88
COL15A1-201ENST00000375001 UBASH3BQ8TF42 649 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 ZNF669Q96BR6 464 aaPredicted RBP20.54■□□□□ 0.88
COL15A1-201ENST00000375001 MYBP10242 640 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 WDR72Q3MJ13 1102 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 LRRN4CLQ8ND94 238 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 PNMA8BQ9ULN7 279 aaPredicted RBP20.54■□□□□ 0.88
COL15A1-201ENST00000375001 AHCYL1O43865 530 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 RPS6KA4O75676 772 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 NME5P56597 212 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 NEDD8Q15843 81 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 TWF2Q6IBS0 349 aaKnown RBP20.54■□□□□ 0.88
COL15A1-201ENST00000375001 TTC39CQ8N584 583 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 ARL10Q8N8L6 244 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 GDPD5Q8WTR4 605 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 JADE3Q92613 823 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 FAM167AQ96KS9 214 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 MRPL4Q9BYD3 311 aaKnown RBP20.54■□□□□ 0.88
COL15A1-201ENST00000375001 INTS13Q9NVM9 706 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 COL15A1P39059 1388 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 SMTNL2Q2TAL5 461 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 WASHC2DQ5SRD0 308 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 BTBD8Q5XKL5 378 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 FAM45BPQ6NSW5 357 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 FOXR1Q6PIV2 292 aa20.54■□□□□ 0.88
COL15A1-201ENST00000375001 LRRC6Q86X45 466 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms