RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SSR1P43307 286 aaKnown RBP18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TAF6P49848 677 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SP3Q02447 781 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 NFX1Q12986 1120 aaKnown RBP18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ACAP1Q15027 740 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GOLGA7BQ2TAP0 167 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SV2CQ496J9 727 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SPDYCQ5MJ68 293 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CFAP58Q5T655 872 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CCSAPQ6IQ19 270 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ARRDC4Q8NCT1 418 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 JOSD2Q8TAC2 188 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PIK3R5Q8WYR1 880 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SLITRK1Q96PX8 696 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PRDM10Q9NQV6 1147 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 METTL5Q9NRN9 209 aaKnown RBP18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GRHL1Q9NZI5 618 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 FAN1Q9Y2M0 1017 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TDRD15B5MCY1 1934 aaKnown RBP18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 KPNA7A9QM74 516 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RNF40O75150 1001 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RPS6KA5O75582 802 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TCF4P15884 667 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CAP1Q01518 475 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SOX4Q06945 474 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 MTMR3Q13615 1198 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GRK7Q8WTQ7 553 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 WNT8BQ93098 351 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ZIM3Q96PE6 472 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RUFY1Q96T51 708 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 FMO2Q99518 471 aa18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CHRNA1P02708 482 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 KRT1P04264 644 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ASGR1P07306 291 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PRKAR2AP13861 404 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CCND3P30281 292 aaPredicted RBP18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SLC25A11Q02978 314 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CCNG2Q16589 344 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PPP1R26Q5T8A7 1209 aaPredicted RBP18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ZDHHC24Q6UX98 284 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 LRIG3Q6UXM1 1119 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TMC3Q7Z5M5 1100 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ACOT1Q86TX2 421 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CRYBG2Q8N1P7 616 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 C12orf29Q8N999 325 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 UBA3Q8TBC4 463 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 STK32AQ8WU08 396 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 KBTBD7Q8WVZ9 684 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 C1orf54Q8WWF1 131 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PPP1R10Q96QC0 940 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TXLNGYQ9BZA5 131 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 TRIM31Q9BZY9 425 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 DNAI2Q9GZS0 605 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CHST7Q9NS84 486 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 VPS18Q9P253 973 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 FEZ2Q9UHY8 353 aaPredicted RBP18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ST3GAL5Q9UNP4 418 aa18.97■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GOLGA8KD6RF30 607 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PTGESO14684 152 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 PPFIA2O75334 1257 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 LRCH4O75427 683 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 FAM163BP0C2L3 166 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 GJC1P36383 396 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RPL21P46778 160 aaKnown RBP18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 CTCFP49711 727 aaPredicted RBP18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 KCNA10Q16322 511 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 ANKS1BQ7Z6G8 1248 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 HACE1Q8IYU2 909 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SLC4A5Q9BY07 1137 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 RNF186Q9NXI6 227 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SNX24Q9Y343 169 aa18.96■□□□□ 0.63
HLA-DQB1-201ENST00000374943 SPTLC1O15269 473 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 AOC2O75106 756 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 KRT7P08729 469 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 HSD17B3P37058 310 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 KCNJ1P48048 391 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PTK6Q13882 451 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 HADHQ16836 314 aaKnown RBP18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ATP13A4Q4VNC1 1196 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FAM47CQ5HY64 1035 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SPOCD1Q6ZMY3 1216 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 DPH6Q7L8W6 267 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TTC30AQ86WT1 665 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TOP6BLQ8N6T0 577 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GOLGA6L1Q8N7Z2 621 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PCSK9Q8NBP7 692 aaKnown RBP18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 OR6B3Q8NGW1 331 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RIN2Q8WYP3 895 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RNF25Q96BH1 459 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FAM105AQ9NUU6 356 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 EFR3BQ9Y2G0 817 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 R3HDM2Q9Y2K5 976 aaKnown RBP18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 A8MXQ7 604 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 E5RJQ4 531 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GPR182O15218 404 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TJP3O95049 919 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FLT3P36888 993 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SNX16P57768 344 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 UAP1Q16222 522 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms