RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 PEX5P50542 639 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 OGDHQ02218 1023 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 ERCC6LQ2NKX8 1250 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 DSTYKQ6XUX3 929 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 FAM43BQ6ZT52 329 aaPredicted RBP16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 DEFB128Q7Z7B8 93 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 TMEM86AQ8N2M4 240 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 B3GALNT2Q8NCR0 500 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 MNS1Q8NEH6 495 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 FEZF2Q8TBJ5 459 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 RSPH1Q8WYR4 309 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 TMEM39AQ9NV64 488 aa16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
NIPAL3-204ENST00000374399 CES2O00748 559 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 KCNK3O14649 394 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 PARNO95453 639 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 PDE4CQ08493 712 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 DAB2IPQ5VWQ8 1189 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 FUKQ8N0W3 1084 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 NOA1Q8NC60 698 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 SLC2A14Q8TDB8 520 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 MCRS1Q96EZ8 462 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 SLC4A5Q9BY07 1137 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 MRPL47Q9HD33 250 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 HCSTQ9UBK5 93 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 PCDHB7Q9Y5E2 793 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 SCINQ9Y6U3 715 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 VWA8A3KMH1 1905 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 TRIM43BA6NCK2 446 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 PROSCO94903 275 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 PTPN1P18031 435 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 RPL34P49207 117 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 RASGEF1CQ8N431 466 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 ANKRD52Q8NB46 1076 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 JOSD2Q8TAC2 188 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 URGCPQ8TCY9 931 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 TRIM43Q96BQ3 446 aaPredicted RBP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 PIWIL1Q96J94 861 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 TNIP3Q96KP6 325 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 SUSD3Q96L08 255 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 HNRNPABQ99729 332 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 KANSL3Q9P2N6 904 aa16.59■□□□□ 0.25
NIPAL3-204ENST00000374399 NLRC5Q86WI3 1866 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 CTAGE15A4D2H0 777 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 SIGLEC16A6NMB1 481 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 E5RJQ4 531 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 TMEM189-UBE2V1I3L0A0 370 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 MYO1FO00160 1098 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 CTAGE8P0CG41 777 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 SETSIPP0DME0 302 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 CTNNA2P26232 953 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 ADORA2BP29275 332 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 LHX1P48742 406 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 ZNF268Q14587 947 aaPredicted RBP16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 DNAJC24Q6P3W2 148 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 TMEM110Q86TL2 294 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 CTAGE6Q86UF2 777 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 CTAGE4Q8IX94 777 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 PBKQ96KB5 322 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 PKMYT1Q99640 499 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 EPC1Q9H2F5 836 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 STRIP2Q9ULQ0 834 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 PTPRDP23468 1912 aa16.58■□□□□ 0.24
NIPAL3-204ENST00000374399 ALPK3Q96L96 1907 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 MYBPHLA2RUH7 354 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 PIK3R2O00459 728 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 CLDN5O00501 218 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 ODC1P11926 461 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 CTNNA1P35221 906 aaKnown RBP16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 RFC1P35251 1148 aaPredicted RBP16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 RGS7P49802 495 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 CDR1P51861 262 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 ELF2Q15723 593 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 TRNP1Q6NT89 227 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 UBE2Q1Q7Z7E8 422 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 STK32AQ8WU08 396 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 KHSRPQ92945 711 aaKnown RBP eCLIP16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 MCEEQ96PE7 176 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 B3GNT5Q9BYG0 378 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 PCDHA3Q9Y5H8 950 aa16.57■□□□□ 0.24
NIPAL3-204ENST00000374399 MIF4GDA9UHW6 222 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 GOLGA8SH3BPF8 625 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 BEST1O76090 585 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 PAX3P23760 479 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 TAS2R40P59535 323 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 ITIH3Q06033 890 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 CKAP4Q07065 602 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 MDH1BQ5I0G3 518 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 AADACL2Q6P093 401 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 FAM183BPQ6ZVS7 135 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 NPAS4Q8IUM7 802 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 SPATA4Q8NEY3 305 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 SPATA18Q8TC71 538 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 ACTRT1Q8TDG2 376 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 SYT15Q9BQS2 421 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 TMEM30AQ9NV96 361 aa16.56■□□□□ 0.24
NIPAL3-204ENST00000374399 WDR35Q9P2L0 1181 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms