RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 IPPQ9Y573 584 aa20.66■□□□□ 0.9
HDAC1-201ENST00000373548 PIRO00625 290 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 KRT10P13645 584 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 CETN2P41208 172 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 LMAN1P49257 510 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 FLT3LGP49771 235 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 CCNG2Q16589 344 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 GOLGA7BQ2TAP0 167 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 OR2W6PQ8NHA6 318 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 FAM76AQ8TAV0 307 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 RAPGEF5Q92565 580 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 ACSF2Q96CM8 615 aaPredicted RBP20.65■□□□□ 0.9
HDAC1-201ENST00000373548 FAM118BQ9BPY3 351 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 UPF3AQ9H1J1 476 aaKnown RBP20.65■□□□□ 0.9
HDAC1-201ENST00000373548 ATP8A1Q9Y2Q0 1164 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 LRCH4O75427 683 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 CD4P01730 458 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 SLC25A11Q02978 314 aaKnown RBP20.65■□□□□ 0.9
HDAC1-201ENST00000373548 STILQ15468 1287 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 SOWAHAQ2M3V2 549 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 NBPF20Q3BBV1 942 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 CEP85LQ5SZL2 805 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 PPP1R26Q5T8A7 1209 aaPredicted RBP20.65■□□□□ 0.9
HDAC1-201ENST00000373548 SPOCD1Q6ZMY3 1216 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 ARRDC4Q8NCT1 418 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 ART4Q93070 314 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 DDX56Q9NY93 547 aaKnown RBP20.65■□□□□ 0.9
HDAC1-201ENST00000373548 GTF2IRD1Q9UHL9 959 aa20.65■□□□□ 0.9
HDAC1-201ENST00000373548 ATF7P17544 494 aaPredicted RBP20.64■□□□□ 0.89
HDAC1-201ENST00000373548 COPS2P61201 443 aa20.64■□□□□ 0.89
HDAC1-201ENST00000373548 MRPS6P82932 125 aaKnown RBP20.64■□□□□ 0.89
HDAC1-201ENST00000373548 SOX4Q06945 474 aaPredicted RBP20.64■□□□□ 0.89
HDAC1-201ENST00000373548 PTK6Q13882 451 aa20.64■□□□□ 0.89
HDAC1-201ENST00000373548 SYDE1Q6ZW31 735 aaPredicted RBP20.64■□□□□ 0.89
HDAC1-201ENST00000373548 POLNQ7Z5Q5 900 aa20.64■□□□□ 0.89
HDAC1-201ENST00000373548 ATL2Q8NHH9 583 aa20.64■□□□□ 0.89
HDAC1-201ENST00000373548 IPO4Q8TEX9 1081 aaKnown RBP20.64■□□□□ 0.89
HDAC1-201ENST00000373548 GRK7Q8WTQ7 553 aa20.64■□□□□ 0.89
HDAC1-201ENST00000373548 PTPN7P35236 360 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 ZNF844Q08AG5 666 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 TRIM32Q13049 653 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 PKDCCQ504Y2 493 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 SPDYCQ5MJ68 293 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 FBXO47Q5MNV8 452 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 KAZNQ674X7 775 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 CCDC114Q96M63 670 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 TSPAN18Q96SJ8 248 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 FAM49BQ9NUQ9 324 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 FEZ2Q9UHY8 353 aaPredicted RBP20.63■□□□□ 0.89
HDAC1-201ENST00000373548 CDY2AQ9Y6F7 541 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 hCG_1818297A0A087WSY0 165 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 LRRD1A4D1F6 860 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 E5RJQ4 531 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 SPTLC1O15269 473 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 TP73O15350 636 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 GAS8O95995 478 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 IL1R2P27930 398 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 FAM102AQ5T9C2 384 aaPredicted RBP20.63■□□□□ 0.89
HDAC1-201ENST00000373548 TWF2Q6IBS0 349 aaKnown RBP20.63■□□□□ 0.89
HDAC1-201ENST00000373548 GDF6Q6KF10 455 aaPredicted RBP20.63■□□□□ 0.89
HDAC1-201ENST00000373548 UNC93AQ86WB7 457 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 TTC30AQ86WT1 665 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 OR6B3Q8NGW1 331 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 EPB41L4BQ9H329 900 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 GOLGA2P5Q9HBQ8 144 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 MTRF1LQ9UGC7 380 aaKnown RBP20.63■□□□□ 0.89
HDAC1-201ENST00000373548 NEU2Q9Y3R4 380 aa20.63■□□□□ 0.89
HDAC1-201ENST00000373548 PIK3R2O00459 728 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 XPOTO43592 962 aaKnown RBP20.62■□□□□ 0.89
HDAC1-201ENST00000373548 IVDP26440 423 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 CDKN2BP42772 138 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 KCTD16Q68DU8 428 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 SESTD1Q86VW0 696 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 SH2D3CQ8N5H7 860 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 WNT8BQ93098 351 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 FAM129AQ9BZQ8 928 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 TMBIM4Q9HC24 238 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 WHRNQ9P202 907 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 ASIC3Q9UHC3 531 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 C3orf70A6NLC5 250 aaPredicted RBP20.62■□□□□ 0.89
HDAC1-201ENST00000373548 KPNA7A9QM74 516 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 TULP2O00295 520 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 SEPT4O43236 478 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 HCRTO43612 131 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 TJP3O95049 919 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 PMS2P54278 862 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 PRKCZQ05513 592 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 ODF2Q5BJF6 829 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 TFDP3Q5H9I0 405 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 FAM183BPQ6ZVS7 135 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 KBTBD7Q8WVZ9 684 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 PIWIL1Q96J94 861 aaKnown RBP20.62■□□□□ 0.89
HDAC1-201ENST00000373548 ZNF560Q96MR9 790 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 LPIN3Q9BQK8 851 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 DPEP3Q9H4B8 488 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 ZWILCHQ9H900 591 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 GDAP2Q9NXN4 497 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 TRPV2Q9Y5S1 764 aa20.62■□□□□ 0.89
HDAC1-201ENST00000373548 RGS7P49802 495 aa20.61■□□□□ 0.89
HDAC1-201ENST00000373548 CAP1Q01518 475 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms