RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 VGLL4Q14135 290 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC18A3Q16572 532 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 TDRD10Q5VZ19 366 aaKnown RBP13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 FAM9CQ8IZT9 166 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 CDC26Q8NHZ8 85 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 MS4A14Q96JA4 679 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 PDCD2LQ9BRP1 358 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 BRD8Q9H0E9 1235 aa13.89□□□□□ -0.19
RAPGEF1-201ENST00000372189 PDE9AO76083 593 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 INHBEP58166 350 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC4A9Q96Q91 983 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 SENP7Q9BQF6 1050 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 STX18Q9P2W9 335 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 P4HA2O15460 535 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 WEE2P0C1S8 567 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 AKR1A1P14550 325 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 DNAL1Q4LDG9 190 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 PGBD3Q8N328 593 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 ATL2Q8NHH9 583 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC30A5Q8TAD4 765 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 MUC3BQ9H195 1237 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 TM4SF1P30408 202 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 ERVK-9P63128 1117 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 ERVK-24P63145 666 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 PRAMEP78395 509 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 SEC23AQ15436 765 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 LY6KQ17RY6 165 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 KRT77Q7Z794 578 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 TC2NQ8N9U0 490 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLITRK1Q96PX8 696 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 VTA1Q9NP79 307 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 SARS2Q9NP81 518 aaKnown RBP13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 MPP6Q9NZW5 540 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 TGFB3P10600 412 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 IRAK1P51617 712 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 MPZL3Q6UWV2 235 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 NYAP1Q6ZVC0 841 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 CDR2LQ86X02 465 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 CYFIP2Q96F07 1278 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 SLC13A1Q9BZW2 595 aa13.88□□□□□ -0.19
RAPGEF1-201ENST00000372189 PHF20L1A8MW92 1017 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 TRPM8Q7Z2W7 1104 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 VPS37AQ8NEZ2 397 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 FAM163AQ96GL9 167 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 B3GALT6Q96L58 329 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 MED24O75448 989 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 UCHL3P15374 230 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 TUBA3EQ6PEY2 450 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 PID1Q7Z2X4 250 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 TTC8Q8TAM2 541 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 ASAP3Q8TDY4 903 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 CCDC28BQ9BUN5 200 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 BFARQ9NZS9 450 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 ARHGAP26Q9UNA1 814 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZBTB39O15060 712 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 FAM200BP0CF97 657 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 HARS2P49590 506 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 CNGA2Q16280 664 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 C15orf52Q6ZUT6 534 aaKnown RBP13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 RCOR2Q8IZ40 523 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 XPNPEP3Q9NQH7 507 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 ABI2Q9NYB9 513 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 OGTO15294 1046 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 MLH1P40692 756 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 FAM43BQ6ZT52 329 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 SIKE1Q9BRV8 207 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 SYBUQ9NX95 663 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 FZD1Q9UP38 647 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 GNB5O14775 395 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 ARSEP51690 589 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 GRB10Q13322 594 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 HIF1AQ16665 826 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 GLRA4Q5JXX5 417 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 RFX8Q6ZV50 586 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 USP49Q70CQ1 688 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 MMGT1Q8N4V1 131 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 CCNYL1Q8N7R7 359 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 RAPGEF5Q92565 580 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 SGSM3Q96HU1 749 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 PPCSQ9HAB8 311 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 HMX1Q9NP08 348 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 GGT7Q9UJ14 662 aa13.87□□□□□ -0.19
RAPGEF1-201ENST00000372189 H3BRB1 525 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 ITIH2P19823 946 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 MED21Q13503 144 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 DEFB128Q7Z7B8 93 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 CPB2Q96IY4 423 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 CNBD2Q96M20 576 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 MCEEQ96PE7 176 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 RANBP17Q9H2T7 1088 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 TUT1Q9H6E5 874 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 EEF2KO00418 725 aaKnown RBP13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZBTB22O15209 634 aa13.86□□□□□ -0.19
RAPGEF1-201ENST00000372189 PRLP01236 227 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms