RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 PLPPR4Q7Z2D5 763 aa17.97■□□□□ 0.47
VEGFA-205ENST00000372067 KCTD6Q8NC69 237 aa17.97■□□□□ 0.47
VEGFA-205ENST00000372067 CDC42EP4Q9H3Q1 356 aaKnown RBP17.97■□□□□ 0.47
VEGFA-205ENST00000372067 SAYSD1Q9NPB0 183 aa17.97■□□□□ 0.47
VEGFA-205ENST00000372067 METTL5Q9NRN9 209 aaKnown RBP17.97■□□□□ 0.47
VEGFA-205ENST00000372067 CORO1CQ9ULV4 474 aaPredicted RBP17.97■□□□□ 0.47
VEGFA-205ENST00000372067 ATP6V1G2O95670 118 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 ZSCAN5DPP0CG00 497 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 TMEM132DQ14C87 1099 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 SYCP2LQ5T4T6 812 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 C6orf118Q5T5N4 469 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 FAM102AQ5T9C2 384 aaPredicted RBP17.96■□□□□ 0.47
VEGFA-205ENST00000372067 NOD2Q9HC29 1040 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 LRRC4CQ9HCJ2 640 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 CPSF3Q9UKF6 684 aaKnown RBP17.96■□□□□ 0.47
VEGFA-205ENST00000372067 H3BRB1 525 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 CHKAP35790 457 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 ABL2P42684 1182 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 ARSEP51690 589 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 AGBL2Q5U5Z8 902 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 RSAD2Q8WXG1 361 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 HPDLQ96IR7 371 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 HERPUD2Q9BSE4 406 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 SYT17Q9BSW7 474 aa17.96■□□□□ 0.47
VEGFA-205ENST00000372067 TUT1Q9H6E5 874 aaKnown RBP17.96■□□□□ 0.47
VEGFA-205ENST00000372067 PAPOLBQ9NRJ5 636 aaKnown RBP17.96■□□□□ 0.47
VEGFA-205ENST00000372067 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 ASAP2O43150 1006 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 CCDC121Q6ZUS5 278 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 MYCBPAPQ8TBZ2 947 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 DDX27Q96GQ7 796 aaKnown RBP17.95■□□□□ 0.46
VEGFA-205ENST00000372067 ACAP3Q96P50 834 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 ZDHHC18Q9NUE0 388 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-205ENST00000372067 SAE1Q9UBE0 346 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-205ENST00000372067 TJP2Q9UDY2 1190 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 C15orf41Q9Y2V0 281 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 DOCK1Q14185 1865 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 PSTPIP1O43586 416 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 GNAT1P11488 350 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 TNFAIP2Q03169 654 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 UBAP2Q5T6F2 1119 aaKnown RBP17.95■□□□□ 0.46
VEGFA-205ENST00000372067 TAOK1Q7L7X3 1001 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 FAM49BQ9NUQ9 324 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 SETD4Q9NVD3 440 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 COL11A1P12107 1806 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-205ENST00000372067 CHN1P15882 459 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 ITIH2P19823 946 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 ATP11AP98196 1134 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 MCL1Q07820 350 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 PPP1R2P3Q6NXS1 205 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 PHF13Q86YI8 300 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-205ENST00000372067 TMEM174Q8WUU8 243 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 NGRNQ9NPE2 291 aaKnown RBP17.95■□□□□ 0.46
VEGFA-205ENST00000372067 SNX9Q9Y5X1 595 aa17.95■□□□□ 0.46
VEGFA-205ENST00000372067 ANP32DO95626 131 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 ETS1P14921 441 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 AMHR2Q16671 573 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 RCOR2Q8IZ40 523 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 GDAP1Q8TB36 358 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 LRRC19Q9H756 370 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 MMP8P22894 467 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 BYSLQ13895 437 aaKnown RBP17.94■□□□□ 0.46
VEGFA-205ENST00000372067 ANKRD20A8PQ5CZ79 823 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 KIAA0319LQ8IZA0 1049 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 OR6B3Q8NGW1 331 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 DNPEPQ9ULA0 475 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 RIPK2O43353 540 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 NPTXRO95502 500 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 RARGP13631 454 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 RFC1P35251 1148 aaPredicted RBP17.94■□□□□ 0.46
VEGFA-205ENST00000372067 SLC26A2P50443 739 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 TMED2Q15363 201 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 PRAMEF19Q5SWL8 479 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 MFN1Q8IWA4 741 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 STRIP2Q9ULQ0 834 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 FER1L6Q2WGJ9 1857 aa17.94■□□□□ 0.46
VEGFA-205ENST00000372067 A6NHS1 94 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 MAGEB2O15479 319 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 LGR5O75473 907 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 IL18RAPO95256 599 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 HOXC6P09630 235 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 YBX3P16989 372 aaKnown RBP eCLIP17.93■□□□□ 0.462e-6■■□□□ 13.8
VEGFA-205ENST00000372067 ZNF484Q5JVG2 852 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 FAM182AQ5T1J6 154 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 USP50Q70EL3 339 aaPredicted RBP17.93■□□□□ 0.46
VEGFA-205ENST00000372067 RBM12BQ8IXT5 1001 aaKnown RBP17.93■□□□□ 0.46
VEGFA-205ENST00000372067 EXD1Q8NHP7 514 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 FAM81AQ8TBF8 368 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 ARHGEF2Q92974 986 aaKnown RBP17.93■□□□□ 0.46
VEGFA-205ENST00000372067 TRAIPQ9BWF2 469 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 MIS12Q9H081 205 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 SUDS3Q9H7L9 328 aaPredicted RBP17.93■□□□□ 0.46
VEGFA-205ENST00000372067 HES2Q9Y543 173 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 LOXHD1Q8IVV2 1947 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 ADGRA2Q96PE1 1338 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 H0YGN5 161 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 KRT15P19012 456 aa17.93■□□□□ 0.46
VEGFA-205ENST00000372067 TPP2P29144 1249 aaPredicted RBP17.93■□□□□ 0.46
VEGFA-205ENST00000372067 ELF3P78545 371 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms