RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TTC4O95801 387 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 CSF2RAP15509 400 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 FGFR4P22455 802 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 GLRA2P23416 452 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 GPC3P51654 580 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 MCCD1P59942 119 aaPredicted RBP12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 ALCAMQ13740 583 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 SIX1Q15475 284 aaPredicted RBP12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 NUGGCQ68CJ6 796 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 TMEM199Q8N511 208 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 RNF149Q8NC42 400 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 ASAP3Q8TDY4 903 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 INPP5DQ92835 1189 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 THOC1Q96FV9 657 aaKnown RBP12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 ZNF570Q96NI8 536 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 LBHD1Q9BQE6 289 aaPredicted RBP12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 CCDC77Q9BR77 488 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 FDXACB1Q9BRP7 624 aaPredicted RBP12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 CDC42EP4Q9H3Q1 356 aaKnown RBP12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 FGFR1OP2Q9NVK5 253 aa12.09□□□□□ -0.47
TSPAN1-201ENST00000372003 HNRNPCL1O60812 293 aaKnown RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 DIAPH2O60879 1101 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CYP1A2P05177 515 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 MAPTP10636 758 aaKnown RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 COMTP21964 271 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 IFNAR2P48551 515 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 RWDD2BP57060 319 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 MGAT3Q09327 533 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 BFSP1Q12934 665 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 PTK6Q13882 451 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 MXD4Q14582 209 aaPredicted RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 MBTPS1Q14703 1052 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 FAM26DQ5JW98 314 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CAPRIN2Q6IMN6 1127 aaKnown RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 RGS9BPQ6ZS82 235 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 C12orf56Q8IXR9 622 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 DAW1Q8N136 415 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 LMO3Q8TAP4 145 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 BSNDQ8WZ55 320 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 KIFAP3Q92845 792 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 SAAL1Q96ER3 474 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 LRMDAQ9H2I8 198 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 ADAMTS10Q9H324 1103 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 PARVGQ9HBI0 331 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 NKIRAS1Q9NYS0 192 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 STARD13Q9Y3M8 1113 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 L3MBTL1Q9Y468 752 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 LRRC42Q9Y546 428 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 A6NHS1 94 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 SMIM23A6NLE4 172 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 NBNO60934 754 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CDH16O75309 829 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 KRT16P08779 473 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 ACRP10323 421 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 STX2P32856 288 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CRYBB1P53674 252 aaPredicted RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 YARSP54577 528 aaKnown RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 PEX3P56589 373 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 SNRPFP62306 86 aaKnown RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CAPSQ13938 189 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 TFDP1Q14186 410 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 STAT4Q14765 748 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CBWD6Q4V339 395 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CBWD3Q5JTY5 395 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CBWD5Q5RIA9 395 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 ANKRD20A2Q5SQ80 823 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 ANKRD20A1Q5TYW2 823 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 ANKRD20A3Q5VUR7 823 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 INTS8Q75QN2 995 aaKnown RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 ZNF720Q7Z2F6 126 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 MYCT1Q8N699 235 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 TMEM40Q8WWA1 233 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 KRT35Q92764 455 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 SNF8Q96H20 258 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 GCOM2Q9BZD3 368 aaPredicted RBP12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 TAS2R14Q9NYV8 317 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 ADAM22Q9P0K1 906 aa12.08□□□□□ -0.48
TSPAN1-201ENST00000372003 MYH9P35579 1960 aaKnown RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 FOXN3O00409 490 aaPredicted RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 LMNAP02545 664 aaKnown RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 ABHD2P08910 425 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 PYGMP11217 842 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 EIF4BP23588 611 aaKnown RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 SLCO1A2P46721 670 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 RASSF2P50749 326 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 CDC42EP1Q00587 391 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 IL9RQ01113 521 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 FPGSQ05932 587 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 NFX1Q12986 1120 aaKnown RBP12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 LPIN1Q14693 890 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 GPNMBQ14956 572 aa12.07□□□□□ -0.48
TSPAN1-201ENST00000372003 SETDB1Q15047 1291 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms