RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 NDRG1Q92597 394 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 SEC16BQ96JE7 1060 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 CFAP57Q96MR6 1250 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 ACAP3Q96P50 834 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 EIF2AQ9BY44 585 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 C12orf65Q9H3J6 166 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 EXOC1LA0A1B0GW35 172 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 ASB14A6NK59 587 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 PSTPIP1O43586 416 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 LRCH4O75427 683 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 RNF8O76064 485 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 TTC4O95801 387 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 PDGFRAP16234 1089 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 DRG2P55039 364 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 BEX3Q00994 111 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 KATNAL2Q8IYT4 538 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 EIF1ADQ8N9N8 165 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 SLC4A11Q8NBS3 891 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 MROH8Q9H579 483 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 ALG13Q9NP73 1137 aaKnown RBP12.37□□□□□ -0.43
PDE6C-201ENST00000371447 DPP3Q9NY33 737 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 RLFQ13129 1914 aa12.37□□□□□ -0.43
PDE6C-201ENST00000371447 TCP11X1B4DZS4 312 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 LIASO43766 372 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 SMPD1P17405 629 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 ABCD1P33897 745 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 MAGEA4P43358 317 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 CDH6P55285 790 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 MOGSQ13724 837 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 GRIK4Q16099 956 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 CCNG2Q16589 344 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 NUGGCQ68CJ6 796 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 RCOR2Q8IZ40 523 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 CHMP6Q96FZ7 201 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TMEM176AQ96HP8 235 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 MAK16Q9BXY0 300 aaKnown RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 FGFR1OP2Q9NVK5 253 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 PRMT7Q9NVM4 692 aaPredicted RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TUBGCP4Q9UGJ1 667 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 MIPP30301 263 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 ATXN1P54253 815 aaKnown RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 KLF1Q13351 362 aaPredicted RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TFDP3Q5H9I0 405 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 ILDR2Q71H61 639 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TADA2BQ86TJ2 420 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 ARFGAP1Q8N6T3 406 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 MAIP1Q8WWC4 291 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 RBM41Q96IZ5 413 aaKnown RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 JPH2Q9BR39 696 aaPredicted RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 DNAJC25-GNG10A0A024R161 153 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 RASA4BC9J798 803 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 BHMG1C9JSJ3 638 aaPredicted RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 H7C0C1 242 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 RASA4O43374 803 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 SSTR1P30872 391 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 ATP5OP48047 213 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 CCNA1P78396 465 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 LAMC2Q13753 1193 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 PTK6Q13882 451 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 EFTUD2Q15029 972 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TTC31Q49AM3 519 aaPredicted RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 ANKRD22Q5VYY1 191 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TAPT1Q6NXT6 567 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 RNF169Q8NCN4 708 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TSPAN16Q9UKR8 245 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 NAALADL1Q9UQQ1 740 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 TNFSF13BQ9Y275 285 aa12.36□□□□□ -0.43
PDE6C-201ENST00000371447 ZNFX1Q9P2E3 1918 aaKnown RBP12.35□□□□□ -0.43
PDE6C-201ENST00000371447 ADCY6O43306 1168 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 NUDT17P0C025 328 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 LCP1P13796 627 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 CYP2B6P20813 491 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 ZNF132P52740 706 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 GOLGA7BQ2TAP0 167 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 KCNV1Q6PIU1 500 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 RUNDC3BQ96NL0 473 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 MRPL45Q9BRJ2 306 aaKnown RBP12.35□□□□□ -0.43
PDE6C-201ENST00000371447 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
PDE6C-201ENST00000371447 PTPRHQ9HD43 1115 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 PIH1D1Q9NWS0 290 aaKnown RBP12.35□□□□□ -0.43
PDE6C-201ENST00000371447 WHRNQ9P202 907 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 IGKV6-21A0A0C4DH24 114 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 LGR5O75473 907 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 SNAI1O95863 264 aaPredicted RBP12.35□□□□□ -0.43
PDE6C-201ENST00000371447 MAGEA9P43362 315 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 MPP2Q14168 576 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 HADHQ16836 314 aaKnown RBP12.35□□□□□ -0.43
PDE6C-201ENST00000371447 MTHFD1LQ6UB35 978 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
PDE6C-201ENST00000371447 UNC45BQ8IWX7 931 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms