RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 TRPV5Q9NQA5 729 aa11.78□□□□□ -0.52
EXOSC1-202ENST00000370885 SPTBN4Q9H254 2564 aa11.78□□□□□ -0.52
EXOSC1-202ENST00000370885 GPR179Q6PRD1 2367 aa11.78□□□□□ -0.52
EXOSC1-202ENST00000370885 EP300Q09472 2414 aaPredicted RBP11.77□□□□□ -0.52
EXOSC1-202ENST00000370885 OTOL1A6NHN0 477 aaPredicted RBP11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 SLC38A8A6NNN8 435 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 LRRIQ3A6PVS8 624 aaPredicted RBP11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 VNN1O95497 513 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 MBD3O95983 291 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 KRT85P78386 507 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 TSPY1Q01534 308 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 SMARCB1Q12824 385 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 GAS6Q14393 721 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 TDRD10Q5VZ19 366 aaKnown RBP11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 TXNDC8Q6A555 127 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 TSSK4Q6SA08 328 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 ITIH5Q86UX2 942 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 GAS2L3Q86XJ1 694 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 CEP57L1Q8IYX8 460 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 TMEM86AQ8N2M4 240 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 DEPDC1BQ8WUY9 529 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 OSBPL6Q9BZF3 934 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 GPR88Q9GZN0 384 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 SDCBP2Q9H190 292 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 DPEP3Q9H4B8 488 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 TASP1Q9H6P5 420 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 C2orf42Q9NWW7 574 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 GTSE1Q9NYZ3 720 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 NDRG2Q9UN36 371 aaKnown RBP11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 PIAS3Q9Y6X2 628 aa11.77□□□□□ -0.53
EXOSC1-202ENST00000370885 ZNF263O14978 683 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 EXOC3O60645 756 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 NOL4O94818 638 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 C4BPAP04003 597 aaKnown RBP11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 TNNI1P19237 187 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 CCNE1P24864 410 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 WEE1P30291 646 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 SYKP43405 635 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 LHX1P48742 406 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 CDH8P55286 799 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 USP46P62068 366 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 SNRPFP62306 86 aaKnown RBP11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 CLDN10P78369 228 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 MYL7Q01449 175 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 DPYDQ12882 1025 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 MTAPQ13126 283 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 SURF1Q15526 300 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 NFE2Q16621 373 aaPredicted RBP11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 CFAP221Q4G0U5 840 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 ZNF852Q6ZMS4 543 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 DPH6Q7L8W6 267 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 MAB21L3Q8N8X9 362 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 SPATA18Q8TC71 538 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 PARD3BQ8TEW8 1205 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 IRF7Q92985 503 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 USP13Q92995 863 aaPredicted RBP11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 MYLPFQ96A32 169 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 CYP2S1Q96SQ9 504 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 SYT15Q9BQS2 421 aa11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 RBM12Q9NTZ6 932 aaKnown RBP11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 SPATA6Q9NWH7 488 aaPredicted RBP11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 ZNF638Q14966 1978 aaKnown RBP11.76□□□□□ -0.53
EXOSC1-202ENST00000370885 OTOGLQ3ZCN5 2332 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 CLDN5O00501 218 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 CHADO15335 359 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 GADD45BO75293 160 aaPredicted RBP11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 RPN1P04843 607 aaKnown RBP11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 CHRNB1P11230 501 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 TDGF1P13385 188 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 BDNFP23560 247 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 CDC25CP30307 473 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 RAP1GAPP47736 663 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 ZXDBP98169 803 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 VEPH1Q14D04 833 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 WDR72Q3MJ13 1102 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 NAIF1Q69YI7 327 aaPredicted RBP11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 TRIM68Q6AZZ1 485 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 KRBA2Q6ZNG9 492 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 HS2ST1Q7LGA3 356 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 SLC9A9Q8IVB4 645 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 SCN4BQ8IWT1 228 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 CMTM8Q8IZV2 173 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 TMEM174Q8WUU8 243 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 FAM3CQ92520 227 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 PCED1BQ96HM7 432 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 MYRFLQ96LU7 910 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 FNBP1Q96RU3 617 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 MMS19Q96T76 1030 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 SMYD3Q9H7B4 428 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 HPS4Q9NQG7 708 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 EXOC1Q9NV70 894 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 CDH9Q9ULB4 789 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms