RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 FAM13CQ8NE31 585 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 ATPIF1Q9UII2 106 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 LDHAP00338 332 aaKnown RBP13.21□□□□□ -0.3
GPC4-201ENST00000370828 TUFMP49411 452 aaKnown RBP13.21□□□□□ -0.3
GPC4-201ENST00000370828 NT5C2P49902 561 aa13.21□□□□□ -0.3
GPC4-201ENST00000370828 RRP1BQ14684 758 aaKnown RBP13.21□□□□□ -0.3
GPC4-201ENST00000370828 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.3
GPC4-201ENST00000370828 EXOC3L1Q86VI1 746 aa13.21□□□□□ -0.3
GPC4-201ENST00000370828 NOL6Q9H6R4 1146 aaKnown RBP13.21□□□□□ -0.3
GPC4-201ENST00000370828 TAF4O00268 1085 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 SLC37A4O43826 429 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 VAV1P15498 845 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 NCKAP1LP55160 1127 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 CDK16Q00536 496 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 BMPR2Q13873 1038 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 PRKG1Q13976 671 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 ZBTB46Q86UZ6 589 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
GPC4-201ENST00000370828 KIAA1586Q9HCI6 787 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 TRIM39Q9HCM9 518 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 SLC24A2Q9UI40 661 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 AFF2P51816 1311 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 BCL10O95999 233 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 HLA-DPA1P20036 260 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
GPC4-201ENST00000370828 PDK3Q15120 406 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 SLC5A9Q2M3M2 681 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 COBLL1Q53SF7 1204 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 PCYOX1LQ8NBM8 494 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 LRMDAQ9H2I8 198 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 LOC102724428A0A0B4J2F2 783 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 GOLGA8TH3BQL2 631 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 TM9SF1O15321 606 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 CBFA2T3O75081 653 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 PAMP19021 973 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 RPA3P35244 121 aaPredicted RBP13.2□□□□□ -0.3
GPC4-201ENST00000370828 SIK1P57059 783 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 C12orf60Q5U649 245 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 MTHFD1LQ6UB35 978 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 DRAXINQ8NBI3 349 aaPredicted RBP13.2□□□□□ -0.3
GPC4-201ENST00000370828 SPIRE2Q8WWL2 714 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 SAC3D1A6NKF1 404 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 CYP11B2P19099 503 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 RPL10AP62906 217 aaKnown RBP13.2□□□□□ -0.3
GPC4-201ENST00000370828 KCNA1Q09470 495 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 ITGADQ13349 1161 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 MPP3Q13368 585 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 NEDD8Q15843 81 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 SH3RF1Q7Z6J0 888 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 GLMNQ92990 594 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 TMEM121Q9BTD3 319 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 OSBPL10Q9BXB5 764 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 EFCAB1Q9HAE3 211 aa13.2□□□□□ -0.3
GPC4-201ENST00000370828 FAM205AQ6ZU69 1335 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 DDX3XO00571 662 aaKnown RBP eCLIP13.19□□□□□ -0.3
GPC4-201ENST00000370828 USP1O94782 785 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 USP10Q14694 798 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 PDPK2PQ6A1A2 396 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 RWDD4Q6NW29 188 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 RPF1Q9H9Y2 349 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 RRN3Q9NYV6 651 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 RABGEF1Q9UJ41 708 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 IQGAP3Q86VI3 1631 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 ADCY6O43306 1168 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 AKAP3O75969 853 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 PROCP04070 461 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 P4HBP07237 508 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 TRIM25Q14258 630 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 CCDC60Q8IWA6 550 aaPredicted RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 ECSITQ9BQ95 431 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 EXOSC4Q9NPD3 245 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 RBAKQ9NYW8 714 aaPredicted RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 TMED5Q9Y3A6 229 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 SMIM31A0A1B0GVY4 71 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 PIK3CDO00329 1044 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 IRF6O14896 467 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 MFN2O95140 757 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 ANPEPP15144 967 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 SSTR1P30872 391 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 QARSP47897 775 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 TFDP1Q14186 410 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 SNRNP35Q16560 246 aaKnown RBP13.19□□□□□ -0.3
GPC4-201ENST00000370828 GSTA3Q16772 222 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 ACAD10Q6JQN1 1059 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 CLEC10AQ8IUN9 316 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 B3GALT6Q96L58 329 aa13.19□□□□□ -0.3
GPC4-201ENST00000370828 COPS7BQ9H9Q2 264 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms