RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SETSIPP0DME0 302 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 ABCD1P33897 745 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 ACOT2P49753 483 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 SLC18A1P54219 525 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 IRX4P78413 519 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 SP4Q02446 784 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 CYP24A1Q07973 514 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 ZRSR2Q15696 482 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 BRDTQ58F21 947 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 RAPH1Q70E73 1250 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 EFCAB3Q8N7B9 438 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 TMEM161BQ8NDZ6 487 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 GMCL1P1Q8NEA9 526 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 MZB1Q8WU39 189 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 NGLY1Q96IV0 654 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 AGBL1Q96MI9 1066 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 TIPINQ9BVW5 301 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 EBF3Q9H4W6 596 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 SMYD3Q9H7B4 428 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 CYB561D2O14569 222 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 TMEM63AO94886 807 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 GSTA2P09210 222 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 GNA15P30679 374 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 CCNFP41002 786 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 NOMO3P69849 1222 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 SEZ6Q53EL9 994 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 C1orf146Q5VVC0 180 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 B3GNT9Q6UX72 402 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 ARID3BQ8IVW6 561 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 PYDC1Q8WXC3 89 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 CPT1BQ92523 772 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 TRAPPC9Q96Q05 1148 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 MXRA8Q9BRK3 442 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 SLC13A1Q9BZW2 595 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 ASCC2Q9H1I8 757 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 A6NJR5 290 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 PPEF1O14829 653 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 OPHN1O60890 802 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 QARSP47897 775 aaKnown RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 BASP1P80723 227 aaKnown RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 LMNB2Q03252 620 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 PTK7Q13308 1070 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 UBAP2LQ14157 1087 aaKnown RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 HSF5Q4G112 596 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 FEZF2Q8TBJ5 459 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 FAM81BQ96LP2 452 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 KMT5AQ9NQR1 393 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 ZNF212Q9UDV6 495 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 RPL26L1Q9UNX3 145 aaKnown RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 MTO1Q9Y2Z2 717 aaKnown RBP12.88□□□□□ -0.35
PHGDH-201ENST00000369407 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
PHGDH-201ENST00000369407 HLA-DRAP01903 254 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 PRKD1Q15139 912 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 OASLQ15646 514 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 CES4AQ5XG92 561 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 LPCAT4Q643R3 524 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 SCUBE1Q8IWY4 988 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 ATP11CQ8NB49 1132 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 GSTCDQ8NEC7 633 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 LRRN4Q8WUT4 740 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 NDNQ99608 321 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 ECSITQ9BQ95 431 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 PHACTR1Q9C0D0 580 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 VPS11Q9H270 941 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 PFDN1O60925 122 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 TOP3BO95985 862 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 OTUD4Q01804 1114 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 DSG1Q02413 1049 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 DEUP1Q05D60 604 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 KBTBD12Q3ZCT8 623 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 DCUN1D2Q6PH85 259 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 ZCCHC23Q6ZST2 131 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 CTAGE3PQ8IX95 158 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 CCDC110Q8TBZ0 833 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 ACTL9Q8TC94 416 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 SENP7Q9BQF6 1050 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 NDE1Q9NXR1 346 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 SLC7A8Q9UHI5 535 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 AGTPBP1Q9UPW5 1226 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 NFIBO00712 420 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 DHX15O43143 795 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 HNRNPCL1O60812 293 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 OR6B1O95007 311 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 RXRBP28702 533 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 YWHAGP61981 247 aaKnown RBP eCLIP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms