RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 GOLGA2P5Q9HBQ8 144 aa11.31□□□□□ -0.6
TUBE1-201ENST00000368657 GPRC5CQ9NQ84 441 aa11.31□□□□□ -0.6
TUBE1-201ENST00000368657 MAN2B2Q9Y2E5 1009 aa11.31□□□□□ -0.6
TUBE1-201ENST00000368657 BTBD3Q9Y2F9 522 aa11.31□□□□□ -0.6
TUBE1-201ENST00000368657 FNDC3AQ9Y2H6 1198 aaKnown RBP11.31□□□□□ -0.6
TUBE1-201ENST00000368657 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
TUBE1-201ENST00000368657 SLC12A7Q9Y666 1083 aa11.31□□□□□ -0.6
TUBE1-201ENST00000368657 SMIM28A0A1B0GU29 152 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 CLEC18AA5D8T8 446 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 MYMKA6NI61 221 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 OAZ2O95190 189 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 P4HBP07237 508 aaKnown RBP11.3□□□□□ -0.6
TUBE1-201ENST00000368657 KRT10P13645 584 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 OPRD1P41143 372 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 LIFRP42702 1097 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 TUFMP49411 452 aaKnown RBP11.3□□□□□ -0.6
TUBE1-201ENST00000368657 PCBP4P57723 403 aaKnown RBP11.3□□□□□ -0.6
TUBE1-201ENST00000368657 NUCB1Q02818 461 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 PTH1RQ03431 593 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 CAPSQ13938 189 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 MTF1Q14872 753 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 VEPH1Q14D04 833 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 TAF12Q16514 161 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 FAM187BQ17R55 369 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 EML3Q32P44 896 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 XKR9Q5GH70 373 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 CLEC18BQ6UXF7 455 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 NOSTRINQ8IVI9 506 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 C4orf19Q8IY42 314 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 REXO1Q8N1G1 1221 aaKnown RBP11.3□□□□□ -0.6
TUBE1-201ENST00000368657 CLEC18CQ8NCF0 446 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 TMEM87BQ96K49 555 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 ZNF578Q96N58 590 aaPredicted RBP11.3□□□□□ -0.6
TUBE1-201ENST00000368657 PGLYRP2Q96PD5 576 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 CRISPLD1Q9H336 500 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 GDAQ9Y2T3 454 aa11.3□□□□□ -0.6
TUBE1-201ENST00000368657 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 ANTXRLA6NF34 631 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 OR6C75A6NL08 312 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 NFATC1O95644 943 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 GABRG2P18507 467 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 MAOBP27338 520 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 GNA11P29992 359 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 YWHABP31946 246 aaKnown RBP11.29□□□□□ -0.6
TUBE1-201ENST00000368657 ARL2P36404 184 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 TNFRSF4P43489 277 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 YWHAHQ04917 246 aaPredicted RBP11.29□□□□□ -0.6
TUBE1-201ENST00000368657 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
TUBE1-201ENST00000368657 INAVAQ3KP66 663 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 KRTAP21-3Q3LHN1 58 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
TUBE1-201ENST00000368657 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 TSC1Q92574 1164 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 GJA10Q969M2 543 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 PDZD7Q9H5P4 517 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 STARD5Q9NSY2 213 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 GMIPQ9P107 970 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 CALCOCO1Q9P1Z2 691 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 FTSJ1Q9UET6 329 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 USP9YO00507 2555 aaPredicted RBP11.29□□□□□ -0.6
TUBE1-201ENST00000368657 ITPR3Q14573 2671 aa11.29□□□□□ -0.6
TUBE1-201ENST00000368657 PCDHGA12O60330 932 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 ADAM23O75077 832 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 POU3F2P20265 443 aaPredicted RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 KIR2DL1P43626 348 aaPredicted RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 FAM160A1Q05DH4 1040 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 TMEM132AQ24JP5 1023 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 Q4G0T1 1027 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 USP49Q70CQ1 688 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 TRMT11Q7Z4G4 463 aaKnown RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 MON1AQ86VX9 555 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 DHX40Q8IX18 779 aaKnown RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 EFCAB13Q8IY85 973 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 RIN3Q8TB24 985 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 ASAP3Q8TDY4 903 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 CCDC12Q8WUD4 166 aaPredicted RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 NAF1Q96HR8 494 aaKnown RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 PNKPQ96T60 521 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 XPNPEP1Q9NQW7 623 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 ZNF638Q14966 1978 aaKnown RBP11.28□□□□□ -0.6
TUBE1-201ENST00000368657 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 NID2Q14112 1375 aa11.28□□□□□ -0.6
TUBE1-201ENST00000368657 K7ENP7 123 aa11.27□□□□□ -0.61
TUBE1-201ENST00000368657 BCAT2O15382 392 aaPredicted RBP11.27□□□□□ -0.61
TUBE1-201ENST00000368657 RFPL3O75679 317 aa11.27□□□□□ -0.61
TUBE1-201ENST00000368657 F11P03951 625 aa11.27□□□□□ -0.61
TUBE1-201ENST00000368657 APODP05090 189 aa11.27□□□□□ -0.61
TUBE1-201ENST00000368657 SFTPCP11686 197 aa11.27□□□□□ -0.61
TUBE1-201ENST00000368657 GLRA2P23416 452 aa11.27□□□□□ -0.61
TUBE1-201ENST00000368657 MCM4P33991 863 aa11.27□□□□□ -0.61
TUBE1-201ENST00000368657 EIF2DP41214 584 aaKnown RBP11.27□□□□□ -0.61
TUBE1-201ENST00000368657 FOSBP53539 338 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms