RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 BRD2P25440 801 aaKnown RBP14.77□□□□□ -0.05
TPM3-211ENST00000368531 GPR15P49685 360 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 RARS2Q5T160 578 aaKnown RBP14.77□□□□□ -0.05
TPM3-211ENST00000368531 SDHAF4Q5VUM1 108 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 ANKRD54Q6NXT1 300 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 ELMSAN1Q6PJG2 1045 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 CCDC149Q6ZUS6 474 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 FEZF2Q8TBJ5 459 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 SPPL2BQ8TCT7 592 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 SLC2A14Q8TDB8 520 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 CPLX3Q8WVH0 158 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 SHC3Q92529 594 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 JAKMIP2Q96AA8 810 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 PABPC5Q96DU9 382 aaKnown RBP14.77□□□□□ -0.05
TPM3-211ENST00000368531 SPAG5Q96R06 1193 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 NAA15Q9BXJ9 866 aaKnown RBP14.77□□□□□ -0.05
TPM3-211ENST00000368531 STK33Q9BYT3 514 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 ZNF518BQ9C0D4 1074 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 PLEKHA4Q9H4M7 779 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 ACP6Q9NPH0 428 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 INSL5Q9Y5Q6 135 aa14.77□□□□□ -0.05
TPM3-211ENST00000368531 CCDC195A0A1B0GUA6 201 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 FSD2A1L4K1 749 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 H3BQ06 376 aaPredicted RBP14.76□□□□□ -0.05
TPM3-211ENST00000368531 ZMYND10O75800 440 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 GFPT2O94808 682 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 LRG1P02750 347 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 HAPLN1P10915 354 aaPredicted RBP14.76□□□□□ -0.05
TPM3-211ENST00000368531 KCNA5P22460 613 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 RFX1P22670 979 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 LTBRP36941 435 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 GRIK1P39086 918 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 PBX1P40424 430 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 TWF1Q12792 350 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 SMARCB1Q12824 385 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 CTC1Q2NKJ3 1217 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 SGO2Q562F6 1265 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 PPP1R26Q5T8A7 1209 aaPredicted RBP14.76□□□□□ -0.05
TPM3-211ENST00000368531 SARM1Q6SZW1 724 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 TMC5Q6UXY8 1006 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 TMEM184AQ6ZMB5 413 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 FAM35AQ86V20 835 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 TCEAL8Q8IYN2 117 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 FUKQ8N0W3 1084 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 STKLD1Q8NE28 680 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 GPR152Q8TDT2 470 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 GIPC2Q8TF65 315 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 C2orf15Q8WU43 125 aaKnown RBP14.76□□□□□ -0.05
TPM3-211ENST00000368531 TFAP2BQ92481 460 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 GPR88Q9GZN0 384 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 FAM124BQ9H5Z6 455 aaPredicted RBP14.76□□□□□ -0.05
TPM3-211ENST00000368531 PRDM6Q9NQX0 595 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 CLEC1BQ9P126 229 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 CEP72Q9P209 647 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 DPP7Q9UHL4 492 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 YIPF1Q9Y548 306 aa14.76□□□□□ -0.05
TPM3-211ENST00000368531 ATP8B3O60423 1300 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 C2orf16Q68DN1 1984 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 F8VZ95 297 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 THAP12O43422 761 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 AP1G2O75843 785 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 PAEPP09466 180 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 VDRP11473 427 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 ALDH1A3P47895 512 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 TUFMP49411 452 aaKnown RBP14.75□□□□□ -0.05
TPM3-211ENST00000368531 ZNF132P52740 706 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 CACNA2D1P54289 1103 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 ARID5AQ03989 594 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 DDR2Q16832 855 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 GOLGA7BQ2TAP0 167 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 SYCE2Q6PIF2 218 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 PAQR9Q6ZVX9 377 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 HDAC7Q8WUI4 952 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 UBE2ZQ9H832 354 aaPredicted RBP14.75□□□□□ -0.05
TPM3-211ENST00000368531 SFXN1Q9H9B4 322 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 PIDD1Q9HB75 910 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 KRT82Q9NSB4 513 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 DZANK1Q9NVP4 752 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 CDH22Q9UJ99 828 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 CNTN6Q9UQ52 1028 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 DOCK6Q96HP0 2047 aa14.75□□□□□ -0.05
TPM3-211ENST00000368531 C1RP00736 705 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 GNA15P30679 374 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 CLCN1P35523 988 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 SOX5P35711 763 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 STAT1P42224 750 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 ZNF75DP51815 510 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 JAM2P57087 298 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 PTK2Q05397 1052 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 CFAP221Q4G0U5 840 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 SLC47A2Q86VL8 602 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 FAM71AQ8IYT1 594 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 UBA3Q8TBC4 463 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 SMG7Q92540 1137 aaKnown RBP14.74□□□□□ -0.05
TPM3-211ENST00000368531 HLA-CQ95604 372 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 SMARCD1Q96GM5 515 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 FUBP3Q96I24 572 aaKnown RBP eCLIP14.74□□□□□ -0.05
TPM3-211ENST00000368531 KCNK16Q96T55 309 aa14.74□□□□□ -0.05
TPM3-211ENST00000368531 HNRNPABQ99729 332 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms