RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ELAVL2Q12926 359 aaKnown RBP10.68□□□□□ -0.7
TPM3-210ENST00000368530 STRN3Q13033 797 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 RAPGEF1Q13905 1077 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 MYBPC2Q14324 1141 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 PPP2R5AQ15172 486 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 MEA1Q16626 185 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 MAPK6Q16659 721 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 UPP1Q16831 310 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 SLC5A9Q2M3M2 681 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 ZNF528Q3MIS6 628 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 XKR4Q5GH76 650 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 LIN9Q5TKA1 542 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 GJB7Q6PEY0 223 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 SYT10Q6XYQ8 523 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 MTSS1LQ765P7 747 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 CBWD2Q8IUF1 395 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 ZBTB8OSQ8IWT0 167 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 C12orf56Q8IXR9 622 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 POMGNT1Q8WZA1 660 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 RUBCNQ92622 972 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 CLDN23Q96B33 292 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 C2orf40Q9H1Z8 148 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 GANQ9H2C0 597 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 LTB4R2Q9NPC1 389 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 BACE2Q9Y5Z0 518 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 VWA8A3KMH1 1905 aa10.68□□□□□ -0.7
TPM3-210ENST00000368530 NCOR2Q9Y618 2525 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 FAM170BA6NMN3 283 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 XYLBO75191 536 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 B3GAT3O94766 335 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 ABLIM3O94929 683 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 NDUFA10O95299 355 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 TKTP29401 623 aaKnown RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 MATR3P43243 847 aaKnown RBP eCLIP10.67□□□□□ -0.7
TPM3-210ENST00000368530 BRCC3P46736 316 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 LIG4P49917 911 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 VAMP7P51809 220 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 SNRPFP62306 86 aaKnown RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 ARID5AQ03989 594 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 ENOX2Q16206 610 aaKnown RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 CBWD6Q4V339 395 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 PABPC1LQ4VXU2 614 aaKnown RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 CBWD3Q5JTY5 395 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 GLRA4Q5JXX5 417 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 CBWD5Q5RIA9 395 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 SFMBT2Q5VUG0 894 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 ZC3H14Q6PJT7 736 aaKnown RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 ZBTB44Q8NCP5 570 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 DDX27Q96GQ7 796 aaKnown RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 KXD1Q9BQD3 176 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 EDEM3Q9BZQ6 932 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 INTS2Q9H0H0 1204 aaKnown RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 NHEJ1Q9H9Q4 299 aaPredicted RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 GOLGA2P5Q9HBQ8 144 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 PTPRHQ9HD43 1115 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 AVENQ9NQS1 362 aaPredicted RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 AJAP1Q9UKB5 411 aaPredicted RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 FBXO4Q9UKT5 387 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 POLIQ9UNA4 740 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 REXO2Q9Y3B8 237 aaKnown RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 FHOD1Q9Y613 1164 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 CDY1Q9Y6F8 540 aa10.67□□□□□ -0.7
TPM3-210ENST00000368530 EPN1Q9Y6I3 576 aaPredicted RBP10.67□□□□□ -0.7
TPM3-210ENST00000368530 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 ARHGEF37A1IGU5 675 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 I3L4J1 428 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 K7ERI5 159 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 KIF2AO00139 706 aaPredicted RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 MEFVO15553 781 aaPredicted RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 LILRB5O75023 590 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 FCARP24071 287 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 TARSP26639 723 aaKnown RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 CYLC1P35663 651 aaPredicted RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 EIF4A3P38919 411 aaKnown RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 GCLMP48507 274 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 MRPL58Q14197 206 aaKnown RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 SNRNP35Q16560 246 aaKnown RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 TDRD12Q587J7 1177 aaKnown RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 KLHDC7AQ5VTJ3 777 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 TANGO2Q6ICL3 276 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 SLC8B1Q6J4K2 584 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 DPY19L2P1Q6NXN4 242 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 INTS8Q75QN2 995 aaKnown RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 CEP120Q8N960 986 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 ZNF461Q8TAF7 563 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 PLEKHO2Q8TD55 490 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 ING5Q8WYH8 240 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 CCDC127Q96BQ5 260 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 MCRS1Q96EZ8 462 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 ZMAT2Q96NC0 199 aaKnown RBP10.66□□□□□ -0.7
TPM3-210ENST00000368530 FAM213AQ9BRX8 229 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 BCO2Q9BYV7 579 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 DEF6Q9H4E7 631 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 SIX2Q9NPC8 291 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.66□□□□□ -0.78e-7■■■■■ 194.6
TPM3-210ENST00000368530 ARHGAP20Q9P2F6 1191 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 DNAI1Q9UI46 699 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 TNFSF13BQ9Y275 285 aa10.66□□□□□ -0.7
TPM3-210ENST00000368530 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms