RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ABLIM3O94929 683 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 OR4Q2P0C623 313 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 CD19P15391 556 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 LMO2P25791 158 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 MRE11P49959 708 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 CBX2Q14781 532 aaPredicted RBP13.47□□□□□ -0.25
EFNA1-201ENST00000368406 MAPRE1Q15691 268 aaKnown RBP13.47□□□□□ -0.25
EFNA1-201ENST00000368406 MDH1BQ5I0G3 518 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 INTS6LQ5JSJ4 861 aaKnown RBP13.47□□□□□ -0.25
EFNA1-201ENST00000368406 ATAT1Q5SQI0 421 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 TPGS2Q68CL5 300 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 GPR149Q86SP6 731 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 ACOT1Q86TX2 421 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 ADHFE1Q8IWW8 467 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 B3GALNT2Q8NCR0 500 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 KREMEN2Q8NCW0 462 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 OR10T2Q8NGX3 314 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
EFNA1-201ENST00000368406 RIPOR3Q96MK2 946 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 UHRF1Q96T88 793 aaPredicted RBP13.47□□□□□ -0.25
EFNA1-201ENST00000368406 ACBD6Q9BR61 282 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 COL25A1Q9BXS0 654 aaPredicted RBP13.47□□□□□ -0.25
EFNA1-201ENST00000368406 DPEP3Q9H4B8 488 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 ATP8B3O60423 1300 aa13.47□□□□□ -0.25
EFNA1-201ENST00000368406 F8VZ95 297 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 NOL4O94818 638 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 SPATA31D3P0C874 917 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 PNMA6AP0CW24 399 aaPredicted RBP13.46□□□□□ -0.26
EFNA1-201ENST00000368406 ATF2P15336 505 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 PTPN1P18031 435 aaKnown RBP13.46□□□□□ -0.26
EFNA1-201ENST00000368406 PBX1P40424 430 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 STAT1P42224 750 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 MTHFRP42898 656 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 CDR1P51861 262 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 RARS2Q5T160 578 aaKnown RBP13.46□□□□□ -0.26
EFNA1-201ENST00000368406 SPATA31D4Q6ZUB0 917 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 LIMS2Q7Z4I7 341 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 SPATA2LQ8IUW3 424 aaPredicted RBP13.46□□□□□ -0.26
EFNA1-201ENST00000368406 GPIHBP1Q8IV16 184 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 FMNL3Q8IVF7 1028 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 C12orf76Q8N812 135 aaPredicted RBP13.46□□□□□ -0.26
EFNA1-201ENST00000368406 SHC3Q92529 594 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 TMEM176AQ96HP8 235 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 PGLYRP2Q96PD5 576 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 TMEM209Q96SK2 561 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 STK33Q9BYT3 514 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 FAM49BQ9NUQ9 324 aa13.46□□□□□ -0.26
EFNA1-201ENST00000368406 ABI2Q9NYB9 513 aaPredicted RBP13.46□□□□□ -0.26
EFNA1-201ENST00000368406 BDP1A6H8Y1 2624 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 CUL9Q8IWT3 2517 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 CCDC195A0A1B0GUA6 201 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ATP2C2O75185 946 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ZMYND10O75800 440 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 GFPT2O94808 682 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 POU2F2P09086 479 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 HNRNPA1P09651 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ACO1P21399 889 aaKnown RBP13.45□□□□□ -0.26
EFNA1-201ENST00000368406 HOXA9P31269 272 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ELF1P32519 619 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 PDE6CP51160 858 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ROR1Q01973 937 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ARID5AQ03989 594 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ZP2Q05996 745 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ASIC2Q16515 512 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 NFE2Q16621 373 aaPredicted RBP13.45□□□□□ -0.26
EFNA1-201ENST00000368406 TSR1Q2NL82 804 aaKnown RBP13.45□□□□□ -0.26
EFNA1-201ENST00000368406 SGO2Q562F6 1265 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 LIN9Q5TKA1 542 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 TMC5Q6UXY8 1006 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 C4orf50Q6ZRC1 276 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 CCDC149Q6ZUS6 474 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 MYLPFQ96A32 169 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 TWNKQ96RR1 684 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 RTP3Q9BQQ7 232 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 APOL5Q9BWW9 433 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 PHF7Q9BWX1 381 aaPredicted RBP13.45□□□□□ -0.26
EFNA1-201ENST00000368406 NAA15Q9BXJ9 866 aaKnown RBP13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ELOVL4Q9GZR5 314 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 ZCWPW1Q9H0M4 648 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 GTF3C4Q9UKN8 822 aa13.45□□□□□ -0.26
EFNA1-201ENST00000368406 LUC7L2Q9Y383 392 aaKnown RBP13.45□□□□□ -0.26
EFNA1-201ENST00000368406 A0A1W2PQJ5 194 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 FOXN3O00409 490 aaPredicted RBP13.44□□□□□ -0.26
EFNA1-201ENST00000368406 PRRG1O14668 218 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 CYP26A1O43174 497 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 THAP12O43422 761 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 PAEPP09466 180 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 CCDC172P0C7W6 258 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 ADORA2BP29275 332 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 GNA15P30679 374 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 SOX5P35711 763 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 RAD23BP54727 409 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 BPIFB4P59827 614 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 PTK2Q05397 1052 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 GPR17Q13304 367 aa13.44□□□□□ -0.26
EFNA1-201ENST00000368406 FIGNQ5HY92 759 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms