RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 COL4A6Q14031 1691 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 TMEM120BA0PK00 339 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 C17orf102A2RUQ5 167 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 EML1O00423 815 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 BACH1O14867 736 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 EXOC3O60645 756 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 CDH16O75309 829 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 STAM2O75886 525 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 ZNF76P36508 570 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 VAMP7P51809 220 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 KCNA1Q09470 495 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 E2F5Q15329 346 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 PPP1R2P3Q6NXS1 205 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 FAM117BQ6P1L5 589 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 METTL7BQ6UX53 244 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 ENOSF1Q7L5Y1 443 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 DNAAF5Q86Y56 855 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 TDRPQ86YL5 185 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 ZDHHC14Q8IZN3 488 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 TEX9Q8N6V9 391 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 ZNF564Q8TBZ8 553 aaPredicted RBP12.17□□□□□ -0.46
USF1-201ENST00000368019 EPS8L1Q8TE68 723 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 FBF1Q8TES7 1133 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 SHC3Q92529 594 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 KRT35Q92764 455 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 INPP5DQ92835 1189 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 KHSRPQ92945 711 aaKnown RBP eCLIP12.17□□□□□ -0.46
USF1-201ENST00000368019 KLHL29Q96CT2 875 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 TRIM11Q96F44 468 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 GPR20Q99678 358 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 CCDC77Q9BR77 488 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 C17orf80Q9BSJ5 609 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 CD320Q9NPF0 282 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 AAASQ9NRG9 546 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 ABCF3Q9NUQ8 709 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 EURLQ9NYK6 297 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 TAS2R14Q9NYV8 317 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 SENP1Q9P0U3 644 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 KLHL14Q9P2G3 628 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 AGAP1Q9UPQ3 857 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 COQ4Q9Y3A0 265 aa12.17□□□□□ -0.46
USF1-201ENST00000368019 TTC3P53804 2025 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.16□□□□□ -0.46
USF1-201ENST00000368019 ATP2C2O75185 946 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 AMHP03971 560 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 MYBL1P10243 752 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 PYGMP11217 842 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 CHRNB2P17787 502 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 FGFR4P22455 802 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 MFAP3P55082 362 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 ATP11AP98196 1134 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 PTPROQ16827 1216 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 GNPTABQ3T906 1256 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 FAM26DQ5JW98 314 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 TBC1D1Q86TI0 1168 aaPredicted RBP12.16□□□□□ -0.46
USF1-201ENST00000368019 PALB2Q86YC2 1186 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 AGGF1Q8N302 714 aaeCLIP12.16□□□□□ -0.46
USF1-201ENST00000368019 AGAP11Q8TF27 550 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 NSMCE1Q8WV22 266 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 TOP1MTQ969P6 601 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 DYDC2Q96IM9 177 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 FAXDC2Q96IV6 333 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 ACCSQ96QU6 501 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 RIT2Q99578 217 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 TRIM6Q9C030 488 aaPredicted RBP12.16□□□□□ -0.46
USF1-201ENST00000368019 PHACTR1Q9C0D0 580 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 UBE2ZQ9H832 354 aaPredicted RBP12.16□□□□□ -0.46
USF1-201ENST00000368019 LARSQ9P2J5 1176 aaKnown RBP12.16□□□□□ -0.46
USF1-201ENST00000368019 DBR1Q9UK59 544 aaKnown RBP12.16□□□□□ -0.46
USF1-201ENST00000368019 STARD13Q9Y3M8 1113 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 TELO2Q9Y4R8 837 aa12.16□□□□□ -0.46
USF1-201ENST00000368019 TRIOO75962 3097 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 TCP11X1B4DZS4 312 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 SPOPO43791 374 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 ZC3H11AO75152 810 aaKnown RBP eCLIP12.15□□□□□ -0.46
USF1-201ENST00000368019 UNC5CO95185 931 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 LYPLA2O95372 231 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 ANP32DO95626 131 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 CLTAP09496 248 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 TRIM49P0CI25 452 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 TRIM49CP0CI26 452 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 IVDP26440 423 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 GTF2H1P32780 548 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 PLA2G5P39877 138 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 MSH2P43246 934 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 MARCKSL1P49006 195 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 YARSP54577 528 aaKnown RBP12.15□□□□□ -0.46
USF1-201ENST00000368019 CDR2Q01850 454 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 CYP4A11Q02928 519 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 KRT17Q04695 432 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 MYO1EQ12965 1108 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 MESDQ14696 234 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 ARHGAP44Q17R89 818 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 LEXMQ3ZCV2 418 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 CCDC38Q502W7 563 aa12.15□□□□□ -0.46
USF1-201ENST00000368019 ODR4Q5SWX8 454 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms