RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 BNC2Q6ZN30 1099 aaPredicted RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 EID3Q8N140 333 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 RNASE11Q8TAA1 199 aaKnown RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 GLRA3O75311 464 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 SIK1P57059 783 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 NUMA1Q14980 2115 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 KCNT1Q5JUK3 1230 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 MACC1Q6ZN28 852 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 TRAPPC9Q96Q05 1148 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 PPP1R16BQ96T49 567 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 C1orf50Q9BV19 199 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 ISCUQ9H1K1 167 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 NEK6Q9HC98 313 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 F5H423 210 aaPredicted RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 MFSD14CQ5VZR4 134 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 LRRC6Q86X45 466 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 ULK2Q8IYT8 1036 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 AP3M1Q9Y2T2 418 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 DGUOKQ16854 277 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 CCNI2Q6ZMN8 369 aaPredicted RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 IL1RL2Q9HB29 575 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 TPRKBQ9Y3C4 175 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 NCK2O43639 380 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 STIP1P31948 543 aaKnown RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 TRIM48Q8IWZ4 208 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 TFB1MQ8WVM0 346 aaKnown RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 POTEMA6NI47 508 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 PIK3CDO00329 1044 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 CRKP46108 304 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 HARS2P49590 506 aaKnown RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 IL31Q6EBC2 164 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 OTOAQ7RTW8 1153 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 WDR41Q9HAD4 459 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 RCVRNP35243 200 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 BCAP31P51572 246 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 NAB2Q15742 525 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 RDM1Q8NG50 284 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 SLC20A1Q8WUM9 679 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 CD2BP2O95400 341 aaKnown RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 FEN1P39748 380 aaKnown RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 NECTIN1Q15223 517 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 DENND1BQ6P3S1 775 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 SLC22A9Q8IVM8 553 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 ZCCHC7Q8N3Z6 543 aaKnown RBP12.89□□□□□ -0.35
TPR-201ENST00000367478 INTS13Q9NVM9 706 aa12.89□□□□□ -0.35
TPR-201ENST00000367478 PDGFRAP16234 1089 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 KATNAL1Q9BW62 490 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 SLC25A13Q9UJS0 675 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 RNF112Q9ULX5 631 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 AAR2Q9Y312 384 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 CCT3P49368 545 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 EFHC1Q5JVL4 640 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 MZT2BQ6NZ67 158 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 CYB5D1Q6P9G0 228 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 LPCAT2Q7L5N7 544 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 JPH1Q9HDC5 661 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 BSDC1Q9NW68 430 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 DBR1Q9UK59 544 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 TTKP33981 857 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 BTKQ06187 659 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 SYN2Q92777 582 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 EIF2AK1Q9BQI3 630 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 COPS7BQ9H9Q2 264 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 PCDHA10Q9Y5I2 948 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 HSMCR30P0CW71 290 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 PTPN7P35236 360 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 PTGER2P43116 358 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 PLA2G4FQ68DD2 849 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 FBXO42Q6P3S6 717 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 SPATA33Q96N06 139 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 PSMD12O00232 456 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 DYNC1LI2O43237 492 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 CYP2E1P05181 493 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 FCER1AP12319 257 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 FAM98BQ52LJ0 330 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 HNRNPLLQ8WVV9 542 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 REXO4Q9GZR2 422 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 PTPRTO14522 1441 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 A0A1W2PQJ5 194 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 TMEM114B3SHH9 223 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 KATNA1O75449 491 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 CCDC130P13994 396 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 PAICSP22234 425 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 APOBEC3FQ8IUX4 373 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms