RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 KRT78Q8N1N4 520 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 FAM162AQ96A26 154 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 OSBPL3Q9H4L5 887 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 COPG2Q9UBF2 871 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 SNAP25P60880 206 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 STAT4Q14765 748 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 PDXDC2PQ6P474 469 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 KLHL32Q96NJ5 620 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 CDH16O75309 829 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 RFX3P48380 749 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 BFSP2Q13515 415 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF394Q53GI3 561 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 CATSPER4Q7RTX7 472 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 COX4I2Q96KJ9 171 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 CEP152O94986 1710 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 STMND1H3BQB6 276 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 GDF11O95390 407 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 AQP5P55064 265 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF200P98182 395 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 NRF1Q16656 503 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 QPCTQ16769 361 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 YAF2Q8IY57 180 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 EFCAB3Q8N7B9 438 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 MAN1C1Q9NR34 630 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF224Q9NZL3 707 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 TRIM13O60858 407 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 IDI1Q13907 227 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ARID3BQ8IVW6 561 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 DGCR6LQ9BY27 220 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 POLE3Q9NRF9 147 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 SRPRBQ9Y5M8 271 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 DENND3A2RUS2 1198 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 FCHO1O14526 889 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 NPTXRO95502 500 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 FGAP02671 866 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 FCER1AP12319 257 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 PSMB9P28065 219 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 NUP62P37198 522 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 RPL5P46777 297 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 XRCC4Q13426 336 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ADD3Q9UEY8 706 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 WDR17Q8IZU2 1322 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 IFT140Q96RY7 1462 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 RASSF9O75901 435 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 CCDC166P0CW27 439 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 TUBA3CQ13748 450 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 TRIQKQ629K1 86 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF570Q96NI8 536 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 YME1L1Q96TA2 773 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 FANCEQ9HB96 536 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 LMTK3Q96Q04 1460 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 KPNA7A9QM74 516 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 DFFAO00273 331 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 GAP43P17677 238 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 HERVK_113P62684 666 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 LRRC63Q05C16 580 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 CIDEBQ9UHD4 219 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 YEATS2Q9ULM3 1422 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 SHANK2Q9UPX8 1470 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 PIPSLA2A3N6 862 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 SSH3Q8TE77 659 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 BRWD1Q9NSI6 2320 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 A0A1W2PRG6 482 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 NOS1APO75052 506 aaPredicted RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 KLHL2O95198 593 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 FOLH1Q04609 750 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 TWF2Q6IBS0 349 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 GLYCTKQ8IVS8 523 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 DQX1Q8TE96 717 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 RNF25Q96BH1 459 aaPredicted RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 KANSL2Q9H9L4 492 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 EIF4G3O43432 1585 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 TRMUO75648 421 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 BTDP43251 543 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 NAB2Q15742 525 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZSWIM2Q8NEG5 633 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 BORCS5Q969J3 196 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 GRIN2AQ12879 1464 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC16A2P36021 539 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 SARSP49591 514 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 PRDM15P57071 1507 aaPredicted RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 IQSEC1Q6DN90 963 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 ABLIM1O14639 778 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC5A3P53794 718 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 ATP12AP54707 1039 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 MTA1Q13330 715 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 EFR3AQ14156 821 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 TTI2Q6NXR4 508 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 CENPOQ9BU64 300 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 AKT1P31749 480 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 TUBA4AP68366 448 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 HSPBAP1Q96EW2 488 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZC3H7BQ9UGR2 993 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 CCNCP24863 283 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 FLT3P36888 993 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 ALDH6A1Q02252 535 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms