RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 C4orf19Q8IY42 314 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 SPATA33Q96N06 139 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 KLHL4Q9C0H6 718 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ALG13Q9NP73 1137 aaKnown RBP12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRKG1Q13976 671 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ANO4Q32M45 955 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 FRA10AC1Q70Z53 315 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZFRQ96KR1 1074 aaKnown RBP12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 RNPEPL1Q9HAU8 725 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 G3BP2Q9UN86 482 aaKnown RBP12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZNF772Q68DY9 489 aaPredicted RBP12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 ABRAQ8N0Z2 381 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 GTF3C2Q8WUA4 911 aaPredicted RBP12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 KLHL11Q9NVR0 708 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 RPL21P46778 160 aaKnown RBP12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 GID8Q9NWU2 228 aa12.29□□□□□ -0.44
CDC42BPA-202ENST00000366764 CD4P01730 458 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 MMP13P45452 471 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRAMEP78395 509 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 STK32AQ8WU08 396 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 SLC20A1Q8WUM9 679 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 KIF12Q96FN5 646 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM111AQ96PZ2 611 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 KIF9Q9HAQ2 790 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 CYP3A43Q9HB55 503 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 MARCOQ9UEW3 520 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 STYK1Q6J9G0 422 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 LRRC39Q96DD0 335 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 CNPY3Q9BT09 278 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZSCAN5CA6NGD5 496 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 PCYT1AP49585 367 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 FUT2Q10981 343 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 MCOLN2Q8IZK6 566 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 SKA2Q8WVK7 121 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 SLC5A5Q92911 643 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 APOPT1Q96IL0 206 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 WRNIP1Q96S55 665 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 CBWD1Q9BRT8 395 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 GANQ9H2C0 597 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 HAO1Q9UJM8 370 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 FIS1Q9Y3D6 152 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 SPATA31A5Q5VU36 1347 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 SPATA31A7Q8IWB4 1347 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 THRAP10827 490 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 XRCC4Q13426 336 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 RASA2Q15283 850 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 RNF43Q68DV7 783 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 IRGCQ6NXR0 463 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZNF184Q99676 751 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 PAPOLBQ9NRJ5 636 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 THAP1Q9NVV9 213 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 RRM1P23921 792 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 NR2C2P49116 596 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 PRKAA2P54646 552 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 CLEC10AQ8IUN9 316 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 MARCH10Q8NA82 808 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 INPP1P49441 399 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 RRP1BQ14684 758 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 EFHC1Q5JVL4 640 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 PCNX4Q63HM2 1172 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 LRRC8EQ6NSJ5 796 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 PLEKHA5Q9HAU0 1116 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 MICAL3Q7RTP6 2002 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 SERPINB3P29508 390 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 GJB7Q6PEY0 223 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 CHST13Q8NET6 341 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 PPP2R3CQ969Q6 453 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 LRRC19Q9H756 370 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 KRT82Q9NSB4 513 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 NCAM2O15394 837 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 MYL4P12829 197 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 FOXR1Q6PIV2 292 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 MTDHQ86UE4 582 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 TFB1MQ8WVM0 346 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 THAP11Q96EK4 314 aa12.28□□□□□ -0.44
CDC42BPA-202ENST00000366764 KANSL1LA0AUZ9 987 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 NPTX2P47972 431 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 SESN2P58004 480 aaPredicted RBP12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 SPP2Q13103 211 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 SLC47A2Q86VL8 602 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 TGM2P21980 687 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 KCNA4P22459 653 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 HYIQ5T013 277 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 CKAP2Q8WWK9 683 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 SEPT1Q8WYJ6 367 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 NCLNQ969V3 563 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 CCDC28BQ9BUN5 200 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 UNC45AQ9H3U1 944 aa12.27□□□□□ -0.44
CDC42BPA-202ENST00000366764 PID1Q7Z2X4 250 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 TMCC1O94876 653 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 SGPL1O95470 568 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 BTBD10Q9BSF8 475 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 CTNNAL1Q9UBT7 734 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 OGTO15294 1046 aa12.27□□□□□ -0.45
CDC42BPA-202ENST00000366764 DEAF1O75398 565 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms