RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 HAPLN2Q9GZV7 340 aa9.24□□□□□ -0.93
HMGB1P39-201ENST00000366304 TMEM60Q9H2L4 133 aa9.24□□□□□ -0.93
HMGB1P39-201ENST00000366304 TTC12Q9H892 705 aaPredicted RBP9.24□□□□□ -0.93
HMGB1P39-201ENST00000366304 ZDHHC4Q9NPG8 344 aa9.24□□□□□ -0.93
HMGB1P39-201ENST00000366304 PCDHA12Q9UN75 941 aa9.24□□□□□ -0.93
HMGB1P39-201ENST00000366304 WNT6Q9Y6F9 365 aa9.24□□□□□ -0.93
HMGB1P39-201ENST00000366304 OR6C75A6NL08 312 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 MARCKSP29966 332 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 HSPA4P34932 840 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 TXKP42681 527 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 GPR15P49685 360 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 YARSP54577 528 aaKnown RBP9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 NLRP12P59046 1061 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 ZBTB6Q15916 424 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 CRY1Q16526 586 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 EML3Q32P44 896 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 ZNF568Q3ZCX4 644 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 ZC2HC1CQ53FD0 456 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 BLOC1S2Q6QNY1 142 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 LPCAT2Q7L5N7 544 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 C11orf74Q86VG3 221 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 LRRTM3Q86VH5 581 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 TRIM22Q8IYM9 498 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 DAW1Q8N136 415 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 MINDY1Q8N5J2 469 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 ALLCQ8N6M5 410 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 CCDC43Q96MW1 224 aaKnown RBP9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 ACAP3Q96P50 834 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 CYP2S1Q96SQ9 504 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 SEPT5Q99719 369 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 LINC00597Q9H2U6 94 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 TOPORSQ9NS56 1045 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 TDP1Q9NUW8 608 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 MMP17Q9ULZ9 603 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 ADAMTS9Q9P2N4 1935 aa9.23□□□□□ -0.93
HMGB1P39-201ENST00000366304 URB1O60287 2271 aaKnown RBP9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 EIF4E1BA6NMX2 242 aaKnown RBP9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 SGK1O00141 431 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 ADAM23O75077 832 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 CBFA2T3O75081 653 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 BAG4O95429 457 aaKnown RBP9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 FGF19O95750 216 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 SERPINF2P08697 491 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 MCF2P10911 925 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 HARSP12081 509 aaKnown RBP9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 CD46P15529 392 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 CDC25CP30307 473 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 LRPAP1P30533 357 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 CLCN1P35523 988 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 EFNA5P52803 228 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 ZXDBP98169 803 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 CYP4F3Q08477 520 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 C19orf57Q0VDD7 668 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 STK3Q13188 491 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 MYBPC2Q14324 1141 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 MTF1Q14872 753 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 PDGFRLQ15198 375 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 ZNF77Q15935 545 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 CALCRLQ16602 461 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 EMC10Q5UCC4 262 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 SDHAF4Q5VUM1 108 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 LYSMD4Q5XG99 296 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 OVOS1Q6IE37 1185 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 LURAP1LQ8IV03 231 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 SCUBE3Q8IX30 993 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 DNAAF2Q9NVR5 837 aaKnown RBP9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 DUS2Q9NX74 493 aaKnown RBP9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 TOR4AQ9NXH8 423 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 SLC6A14Q9UN76 642 aa9.22□□□□□ -0.93
HMGB1P39-201ENST00000366304 A0A087WV48 116 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 K7ERI5 159 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 OPHN1O60890 802 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 CXCL8P10145 99 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 ITPKBP27987 946 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 AVPR1AP37288 418 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 NPTX2P47972 431 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 SLC6A11P48066 632 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 BFSP1Q12934 665 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 USP4Q13107 963 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 DMP1Q13316 513 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 SLC39A12Q504Y0 691 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 PCSK4Q6UW60 755 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 ITIH5Q86UX2 942 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 MON1AQ86VX9 555 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 SLC41A1Q8IVJ1 513 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 EFCAB13Q8IY85 973 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 ZNF843Q8N446 348 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 HDDC3Q8N4P3 179 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 CPA6Q8N4T0 437 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 IL17RCQ8NAC3 791 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 TTC16Q8NEE8 873 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 LRRC15Q8TF66 581 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 OSCP1Q8WVF1 389 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 ZCWPW1Q9H0M4 648 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 TUFT1Q9NNX1 390 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 TMLHEQ9NVH6 421 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 ARHGAP28Q9P2N2 729 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 DKK4Q9UBT3 224 aa9.21□□□□□ -0.94
HMGB1P39-201ENST00000366304 RAI2Q9Y5P3 530 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms