RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 REXO1L1PQ8IX06 675 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 RNF149Q8NC42 400 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 PGBD4Q96DM1 585 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 CHP1Q99653 195 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 MRPL4Q9BYD3 311 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 MIOSQ9NXC5 875 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 GCNT4Q9P109 453 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 KANSL3Q9P2N6 904 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 PCDHB8Q9UN66 801 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 PIN4Q9Y237 131 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 USP20Q9Y2K6 914 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 ADGRG1Q9Y653 693 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 ZNF233A6NK53 670 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 TGM5O43548 720 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 FOXD2O60548 495 aaPredicted RBP12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 POMCP01189 267 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 ADRB2P07550 413 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 TRIM49P0CI25 452 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 TRIM49CP0CI26 452 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 UCHL3P15374 230 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 SLC9A1P19634 815 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 CYLC1P35663 651 aaPredicted RBP12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 PSEN1P49768 467 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 PTENP60484 403 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 POLR2FP61218 127 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 MYL7Q01449 175 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 CYP24A1Q07973 514 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 CETN1Q12798 172 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 PPP2R5DQ14738 602 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 MTF1Q14872 753 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 MAPK6Q16659 721 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 CBWD6Q4V339 395 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 CBWD3Q5JTY5 395 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 CBWD5Q5RIA9 395 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 C1orf220Q5T0J3 134 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 IL31Q6EBC2 164 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 LILRA6Q6PI73 481 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 ZNF852Q6ZMS4 543 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 MRPL10Q7Z7H8 261 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 CBWD2Q8IUF1 395 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 ZSWIM2Q8NEG5 633 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 PARD3BQ8TEW8 1205 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 FZD8Q9H461 694 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 MINDY3Q9H8M7 445 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 SIX2Q9NPC8 291 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 AIPL1Q9NZN9 384 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 AGO2Q9UKV8 859 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 ZMIZ1Q9ULJ6 1067 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 MRPS17Q9Y2R5 130 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 PRG3Q9Y2Y8 225 aaPredicted RBP12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 PCDHB2Q9Y5E7 798 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 EPN1Q9Y6I3 576 aaPredicted RBP12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 ADAMTS20P59510 1910 aa12.05□□□□□ -0.48
CSNK1E-202ENST00000366216 A0A0B4J269 797 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 SSU72P8A0A1W2PR75 194 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 GOLGA8IPA6NC78 632 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 LRRC53A6NM62 1247 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 GOLGA8JA6NMD2 632 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 ACKR2O00590 384 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 TOM1L1O75674 476 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 ZMYND10O75800 440 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 NDUFA10O95299 355 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 PRKCBP05771 671 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 SRGAP2CP0DJJ0 459 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 TNNT1P13805 278 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 RPL17P18621 184 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 HOXA11P31270 313 aaPredicted RBP12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 DLG4P78352 724 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 CLDN10P78369 228 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 CDC42EP1Q00587 391 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 DSG1Q02413 1049 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 ADCY1Q08828 1119 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 FAM187BQ17R55 369 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 DNTTIP2Q5QJE6 756 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 SFMBT2Q5VUG0 894 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 TRIM65Q6PJ69 517 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 GRASPQ7Z6J2 395 aaPredicted RBP12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 RHPN2Q8IUC4 686 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 COLGALT2Q8IYK4 626 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 ZNF687Q8N1G0 1237 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 EHBP1Q8NDI1 1231 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 PLEKHO2Q8TD55 490 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 FGF13Q92913 245 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 SAAL1Q96ER3 474 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 ACO2Q99798 780 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 KXD1Q9BQD3 176 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 TARS2Q9BW92 718 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 INTS2Q9H0H0 1204 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 RSAD1Q9HA92 442 aa12.04□□□□□ -0.48
CSNK1E-202ENST00000366216 EIF3CLB5ME19 914 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 NRG2O14511 850 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 SERPING1P05155 500 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 EDN1P05305 212 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 PROZP22891 400 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 MXI1P50539 228 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 PPP3CAQ08209 521 aa12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 SIM2Q14190 667 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-202ENST00000366216 PSMD6Q15008 389 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms