RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 DUSP28Q4G0W2 176 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ANKRD20A2Q5SQ80 823 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 FAM102AQ5T9C2 384 aaPredicted RBP9.65□□□□□ -0.86
CALD1-202ENST00000361901 ANKRD20A1Q5TYW2 823 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ANKRD20A3Q5VUR7 823 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ACAD10Q6JQN1 1059 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 MTHFD1LQ6UB35 978 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 DSTYKQ6XUX3 929 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 TAS1R3Q7RTX0 852 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 HACE1Q8IYU2 909 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ZNF606Q8WXB4 792 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 PTPN18Q99952 460 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 NTPCRQ9BSD7 190 aaKnown RBP9.65□□□□□ -0.86
CALD1-202ENST00000361901 DPPA5A6NC42 116 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 GPR25O00155 361 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 MED7O43513 233 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 SMIM10L2AP0DMW4 78 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 SMIM10L2BP0DMW5 78 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 PRKCIP41743 596 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 SH3BGRP55822 239 aaPredicted RBP9.65□□□□□ -0.87
CALD1-202ENST00000361901 FCGRTP55899 365 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 PPP6R3Q5H9R7 873 aaPredicted RBP9.65□□□□□ -0.87
CALD1-202ENST00000361901 ACOT1Q86TX2 421 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 CREG2Q8IUH2 290 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 KIF2BQ8N4N8 673 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 EMC1Q8N766 993 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 PAF1Q8N7H5 531 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 KRT35Q92764 455 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 MFSD14AQ96MC6 490 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 ZIM3Q96PE6 472 aa9.65□□□□□ -0.87
CALD1-202ENST00000361901 RRN3P2A6NIE6 340 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 CAPN9O14815 690 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 TREHO43280 583 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 OPHN1O60890 802 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 SNAI1O95863 264 aaPredicted RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 FKBP1BP68106 108 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 RBP5P82980 135 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 RNASELQ05823 741 aaKnown RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 HP1BP3Q5SSJ5 553 aaPredicted RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 MEI1Q5TIA1 1274 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 FOXR2Q6PJQ5 311 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 MAGEC3Q8TD91 643 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 HASPINQ8TF76 798 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 RNF14Q9UBS8 474 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 TTC7AQ9ULT0 858 aaPredicted RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 NOVA2Q9UNW9 492 aaKnown RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 A0A1B0GVG6 124 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 SLC15A5A6NIM6 579 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 ZSCAN9O15535 394 aaPredicted RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 HUS1O60921 280 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 MMP3P08254 477 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 SKIP12755 728 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 MARCKSL1P49006 195 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 CRHR2Q13324 411 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 KRT81Q14533 505 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 NOTUMQ6P988 496 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 ZNF354CQ86Y25 554 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 WDR49Q8IV35 697 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 CEP70Q8NHQ1 597 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 SHC3Q92529 594 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 ARHGEF2Q92974 986 aaKnown RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 ATP6V1G3Q96LB4 118 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 RAB17Q9H0T7 212 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 TIMM13Q9Y5L4 95 aaPredicted RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 DLEC1Q9Y238 1755 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 PJA2O43164 708 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 GAS8O95995 478 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 PSEN2P49810 448 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 WNT7BP56706 349 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 FMO1Q01740 532 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 BLMHQ13867 455 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 HADHQ16836 314 aaKnown RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 KCNT1Q5JUK3 1230 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 SYCP2LQ5T4T6 812 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 CPNE8Q86YQ8 564 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 FAM71AQ8IYT1 594 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 TMCO5AQ8N6Q1 288 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 USP38Q8NB14 1042 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 PPTC7Q8NI37 304 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 ATG4AQ8WYN0 398 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 NR1H4Q96RI1 486 aaPredicted RBP9.64□□□□□ -0.87
CALD1-202ENST00000361901 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 QSER1Q2KHR3 1735 aa9.64□□□□□ -0.87
CALD1-202ENST00000361901 XPOTO43592 962 aaKnown RBP9.63□□□□□ -0.87
CALD1-202ENST00000361901 ZBTB48P10074 688 aaPredicted RBP9.63□□□□□ -0.87
CALD1-202ENST00000361901 KRT3P12035 628 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 LCP1P13796 627 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 SLCO1A2P46721 670 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 RTP1P59025 263 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 ADCY1Q08828 1119 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 RFX6Q8HWS3 928 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 WDR75Q8IWA0 830 aaKnown RBP9.63□□□□□ -0.87
CALD1-202ENST00000361901 HELQQ8TDG4 1101 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 C18orf8Q96DM3 657 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 NDNQ99608 321 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
CALD1-202ENST00000361901 ST6GALNAC4Q9H4F1 302 aa9.63□□□□□ -0.87
CALD1-202ENST00000361901 SMYD3Q9H7B4 428 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms