RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 POLBP06746 335 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 FSCN1Q16658 493 aaKnown RBP19.37■□□□□ 0.69
CLIP2-202ENST00000361545 FKBP1CQ5VVH2 108 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 TSPAN17Q96FV3 270 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 SLITRK3O94933 977 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 LUC7L3O95232 432 aaKnown RBP19.37■□□□□ 0.69
CLIP2-202ENST00000361545 ASS1P00966 412 aaKnown RBP19.37■□□□□ 0.69
CLIP2-202ENST00000361545 BCAT1P54687 386 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 LAMB3Q13751 1172 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 TTI2Q6NXR4 508 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 DDX42Q86XP3 938 aaKnown RBP eCLIP19.37■□□□□ 0.69
CLIP2-202ENST00000361545 ELMO3Q96BJ8 720 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 ITGA8P53708 1063 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 RPL10AP62906 217 aaKnown RBP19.37■□□□□ 0.69
CLIP2-202ENST00000361545 SV2AQ7L0J3 742 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 CERS5Q8N5B7 392 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 VGLL2Q8N8G2 317 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 ZNF669Q96BR6 464 aaPredicted RBP19.37■□□□□ 0.69
CLIP2-202ENST00000361545 KLF6Q99612 283 aaPredicted RBP19.37■□□□□ 0.69
CLIP2-202ENST00000361545 KIAA1257Q9ULG3 409 aa19.37■□□□□ 0.69
CLIP2-202ENST00000361545 CFAP99D6REC4 459 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 RPLP2P05387 115 aaKnown RBP19.36■□□□□ 0.69
CLIP2-202ENST00000361545 CHRM3P20309 590 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 OTOP1Q7RTM1 612 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 CARNMT1Q8N4J0 409 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 PPP1R13LQ8WUF5 828 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 SENP1Q9P0U3 644 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 KYNUQ16719 465 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 TMC2Q8TDI7 906 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 APOL5Q9BWW9 433 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 PCDHB12Q9Y5F1 795 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 SLC12A8A0AV02 714 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 EGFRP00533 1210 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 NAPEPLDQ6IQ20 393 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 MOB2Q70IA6 237 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 RPAINQ86UA6 219 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 FAM172AQ8WUF8 416 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 HPSEQ9Y251 543 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 SALL3Q9BXA9 1300 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 WEE1P30291 646 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 HSPA9P38646 679 aaKnown RBP19.36■□□□□ 0.69
CLIP2-202ENST00000361545 LHX1P48742 406 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 PTGISQ16647 500 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 MEI1Q5TIA1 1274 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 FAM131BQ86XD5 332 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 DDX43Q9NXZ2 648 aaKnown RBP19.36■□□□□ 0.69
CLIP2-202ENST00000361545 CD274Q9NZQ7 290 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 DSEQ9UL01 958 aa19.36■□□□□ 0.69
CLIP2-202ENST00000361545 MTSS1O43312 755 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 SLURP2P0DP57 97 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 ACAT1P24752 427 aaKnown RBP19.35■□□□□ 0.69
CLIP2-202ENST00000361545 PEX19P40855 299 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 TPCN2Q8NHX9 752 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 BLOC1S5Q8TDH9 187 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 TMEM176AQ96HP8 235 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 PLAGL2Q9UPG8 496 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 ZBTB39O15060 712 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 FOXP2O15409 715 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 ESRRGP62508 458 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 OR2W6PQ8NHA6 318 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 DDI1Q8WTU0 396 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 PSEN2P49810 448 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 PTK7Q13308 1070 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 TAF11Q15544 211 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 SLC47A2Q86VL8 602 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 RFWD2Q8NHY2 731 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 CRLS1Q9UJA2 301 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 MAGEA4P43358 317 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 GUCY1A3Q02108 690 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 EMC1Q8N766 993 aa19.35■□□□□ 0.69
CLIP2-202ENST00000361545 ARHGAP10A1A4S6 786 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 SUPT3HB4E1H0 165 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 SMIM22K7EJ46 135 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 STX7O15400 261 aaKnown RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 CDH16O75309 829 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 SUPT3HO75486 399 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 AVPR1AP37288 418 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 BTG3Q14201 252 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 TBC1D19Q8N5T2 526 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 CALML6Q8TD86 181 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 PSMC3IPQ9P2W1 217 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 MARCOQ9UEW3 520 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 PPLO60437 1756 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 MYL4P12829 197 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 SPRP35270 261 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 EPHB3P54753 998 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 PPIL2Q13356 520 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 POLD3Q15054 466 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 USP38Q8NB14 1042 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 TEKT4Q8WW24 435 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 PPP1R2P1Q96PQ5 205 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 DEPDC5O75140 1603 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 PTPN11Q06124 597 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-202ENST00000361545 OVOS1Q6IE37 1185 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 NLRP14Q86W24 1093 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 ITM2BQ9Y287 266 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 KIF20BQ96Q89 1820 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 PPP3CCP48454 512 aa19.34■□□□□ 0.69
CLIP2-202ENST00000361545 RHBDL3P58872 404 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms