RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 GUCY2CP25092 1073 aa21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 ICA1LQ8NDH6 482 aa21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 ATL2Q8NHH9 583 aa21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 MED8Q96G25 268 aa21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 MTG1Q9BT17 334 aaPredicted RBP21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 CEP41Q9BYV8 373 aa21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 COMTP21964 271 aa21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 GJC2Q5T442 439 aaPredicted RBP21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 UBQLN1Q9UMX0 589 aaKnown RBP21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
CDC42BPB-201ENST00000361246 MFSD10Q14728 455 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 TSEN34Q9BSV6 310 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 IRX2Q9BZI1 471 aaPredicted RBP21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 STX7O15400 261 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 PYGBP11216 843 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 STARD3Q14849 445 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 C7orf25Q9BPX7 421 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 TRPM5Q9NZQ8 1165 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 PSMD3O43242 534 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 SRP72O76094 671 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 CLEC16AQ2KHT3 1053 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 GALNTL6Q49A17 601 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 C3orf62Q6ZUJ4 267 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 CELF4Q9BZC1 486 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 DDX43Q9NXZ2 648 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 MOXD2PA6NHM9 499 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 SLC1A1P43005 524 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 C3orf67Q6ZVT6 689 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 LUC7L3O95232 432 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 AMHP03971 560 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 ANTXR2P58335 489 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 STILQ15468 1287 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 FBXO38Q6PIJ6 1188 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 LRRC1Q9BTT6 524 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 E9PCH4 1651 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 CFAP99D6REC4 459 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 LAMTOR4Q0VGL1 99 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 FNDC3BQ53EP0 1204 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 DNAAF5Q86Y56 855 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 CBWD2Q8IUF1 395 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 GIMAP4Q9NUV9 329 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 NUDT5Q9UKK9 219 aa21.12■□□□□ 0.97
CDC42BPB-201ENST00000361246 RGS4P49798 205 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 TOMM20Q15388 145 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 AHCYL2Q96HN2 611 aaKnown RBP21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 PFDN1O60925 122 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 FGFR2P21802 821 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 CYFIP2Q96F07 1278 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 TRABDQ9H4I3 376 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 FAM32AQ9Y421 112 aaKnown RBP21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 TCP11X1B4DZS4 312 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 RHOCP08134 193 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 PDK1Q15118 436 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 ALKBH2Q6NS38 261 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 ADAM32Q8TC27 787 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 ZNF669Q96BR6 464 aaPredicted RBP21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 SRGNP10124 158 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 NT5MQ9NPB1 228 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 THEGQ9P2T0 379 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 KLF15Q9UIH9 416 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 H3BRB1 525 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 ZNF484Q5JVG2 852 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 TMED8Q6PL24 325 aaPredicted RBP21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 MPZL3Q6UWV2 235 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 GPRASP2Q96D09 838 aa21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 TUT1Q9H6E5 874 aaKnown RBP21.11■□□□□ 0.97
CDC42BPB-201ENST00000361246 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 CUL2Q13617 745 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 PGS1Q32NB8 556 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 SARM1Q6SZW1 724 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 CEP70Q8NHQ1 597 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 P2RX7Q99572 595 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 MIR1-1HGQ9H1L0 117 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 SCOCQ9UIL1 159 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 RCAN1P53805 252 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 ZDHHC15Q96MV8 337 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 ASCC2Q9H1I8 757 aaPredicted RBP21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 APPL1Q9UKG1 709 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 CYP7B1O75881 506 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 PPP2R2AP63151 447 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 BYSLQ13895 437 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 FEZF2Q8TBJ5 459 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 PIH1D1Q9NWS0 290 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 PIK3C2BO00750 1634 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 PNPLA4P41247 253 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 NT5C2P49902 561 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 OXCT1P55809 520 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 POU4F1Q01851 419 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 CCDC15Q0P6D6 951 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 PPM1LQ5SGD2 360 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 OR2W6PQ8NHA6 318 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 TSPAN17Q96FV3 270 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 ZFYVE1Q9HBF4 777 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 RNF112Q9ULX5 631 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 IMPDH2P12268 514 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 INSRRP14616 1297 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 ALOX15P16050 662 aaPredicted RBP21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 KRT4P19013 534 aa21.1■□□□□ 0.97
CDC42BPB-201ENST00000361246 CELF6Q96J87 481 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms