RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 TRAV19A0A0A6YYK7 116 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 NPHP3-ACAD11A0A0J9YXS1 232 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 KPNA7A9QM74 516 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 SLC26A4O43511 780 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 FAM13AO94988 1023 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 CKMP06732 381 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 PNPLA4P41247 253 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 CDR1P51861 262 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 ATP2C1P98194 919 aaPredicted RBP14.91□□□□□ -0.02
VPS29-201ENST00000360579 LMAN2Q12907 356 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 ZNF77Q15935 545 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 RILPL1Q5EBL4 403 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 ARSHQ5FYA8 562 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 SLFN12LQ6IEE8 588 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 NT5DC4Q86YG4 428 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 FSIP1Q8NA03 581 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 RIN3Q8TB24 985 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 LEO1Q8WVC0 666 aaPredicted RBP14.91□□□□□ -0.02
VPS29-201ENST00000360579 CNOT6LQ96LI5 555 aaKnown RBP14.91□□□□□ -0.02
VPS29-201ENST00000360579 ZSCAN31Q96LW9 406 aaPredicted RBP14.91□□□□□ -0.02
VPS29-201ENST00000360579 PLIN2Q99541 437 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 REEP2Q9BRK0 252 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 PI4K2AQ9BTU6 479 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 TMEM121BQ9BXQ6 578 aaPredicted RBP14.91□□□□□ -0.02
VPS29-201ENST00000360579 ANKRD11Q6UB99 2663 aaPredicted RBP14.91□□□□□ -0.02
VPS29-201ENST00000360579 TSC2P49815 1807 aa14.91□□□□□ -0.02
VPS29-201ENST00000360579 TRAK2O60296 914 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 ALDH1A2O94788 518 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 NOL4O94818 638 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 TIE1P35590 1138 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 DPP6P42658 865 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 ACOT2P49753 483 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 PDE6CP51160 858 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 ZNF131P52739 623 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 USP4Q13107 963 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 ACAP1Q15027 740 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 EML3Q32P44 896 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 TMEM119Q4V9L6 283 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 NAIF1Q69YI7 327 aaPredicted RBP14.9□□□□□ -0.02
VPS29-201ENST00000360579 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 RASSF3Q86WH2 238 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 EZH1Q92800 747 aaPredicted RBP14.9□□□□□ -0.02
VPS29-201ENST00000360579 GATA6Q92908 595 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 MYRFLQ96LU7 910 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 ACBD6Q9BR61 282 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 SCNM1Q9BWG6 230 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 SLC32A1Q9H598 525 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 TRPC7Q9HCX4 862 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 EVLQ9UI08 416 aaPredicted RBP14.9□□□□□ -0.02
VPS29-201ENST00000360579 PCDHB13Q9Y5F0 798 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 WNT6Q9Y6F9 365 aa14.9□□□□□ -0.02
VPS29-201ENST00000360579 EML5Q05BV3 1969 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 VWA3AA6NCI4 1184 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 CDX4O14627 284 aaPredicted RBP14.89□□□□□ -0.03
VPS29-201ENST00000360579 NFATC1O95644 943 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 KRT18P05783 430 aaKnown RBP14.89□□□□□ -0.03
VPS29-201ENST00000360579 TCF3P15923 654 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 SPINK2P20155 84 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 GTF2BQ00403 316 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 ARL6IP4Q66PJ3 421 aaKnown RBP14.89□□□□□ -0.03
VPS29-201ENST00000360579 LMBRD2Q68DH5 695 aaPredicted RBP14.89□□□□□ -0.03
VPS29-201ENST00000360579 ANO7Q6IWH7 933 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 SLC39A4Q6P5W5 647 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 GPBP1Q86WP2 473 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 TTC16Q8NEE8 873 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 USP33Q8TEY7 942 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 CALML4Q96GE6 196 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 AK8Q96MA6 479 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 NUSAP1Q9BXS6 441 aaKnown RBP14.89□□□□□ -0.03
VPS29-201ENST00000360579 TPSD1Q9BZJ3 242 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 TMLHEQ9NVH6 421 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 AGO2Q9UKV8 859 aaKnown RBP14.89□□□□□ -0.03
VPS29-201ENST00000360579 INVSQ9Y283 1065 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 KIF3AQ9Y496 699 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 PKD1L2Q7Z442 2459 aa14.89□□□□□ -0.03
VPS29-201ENST00000360579 MYH11P35749 1972 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 SRRM3A6NNA2 597 aaPredicted RBP14.88□□□□□ -0.03
VPS29-201ENST00000360579 HUS1O60921 280 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 TBCAO75347 108 aaKnown RBP14.88□□□□□ -0.03
VPS29-201ENST00000360579 TADA3O75528 432 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 IL18RAPO95256 599 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 DHPSP49366 369 aaPredicted RBP14.88□□□□□ -0.03
VPS29-201ENST00000360579 GPR15P49685 360 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 IRX4P78413 519 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 MYL7Q01449 175 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 KCNB1Q14721 858 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 DDR2Q16832 855 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 UAP1L1Q3KQV9 507 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 LPCAT2Q7L5N7 544 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 EFCAB13Q8IY85 973 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 TMEM86AQ8N2M4 240 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 SPATA18Q8TC71 538 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 ZCCHC14Q8WYQ9 949 aaKnown RBP14.88□□□□□ -0.03
VPS29-201ENST00000360579 PIGKQ92643 395 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 SPACA7Q96KW9 195 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 MMP17Q9ULZ9 603 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 NEUROG3Q9Y4Z2 214 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 STYXL1Q9Y6J8 313 aa14.88□□□□□ -0.03
VPS29-201ENST00000360579 PATE3B3GLJ2 98 aa14.87□□□□□ -0.03
VPS29-201ENST00000360579 TNFRSF10BO14763 440 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms