RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 HOXA2O43364 376 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 OR1G1P47890 313 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 GSCP56915 257 aaPredicted RBP24.51■■□□□ 1.51
SDF4-202ENST00000360001 IKBKEQ14164 716 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 PPP1R15BQ5SWA1 713 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.51■■□□□ 1.513e-10■■□□□ 11.5
SDF4-202ENST00000360001 C3orf20Q8ND61 904 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 MNS1Q8NEH6 495 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 SPATA18Q8TC71 538 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 SLC2A14Q8TDB8 520 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 PRDM5Q9NQX1 630 aaPredicted RBP24.51■■□□□ 1.51
SDF4-202ENST00000360001 FNDC1Q4ZHG4 1894 aaPredicted RBP24.5■■□□□ 1.51
SDF4-202ENST00000360001 TULP2O00295 520 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 SETSIPP0DME0 302 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 COMTP21964 271 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 ADORA2BP29275 332 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 TKTP29401 623 aaKnown RBP24.5■■□□□ 1.51
SDF4-202ENST00000360001 DNAJC24Q6P3W2 148 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 CPNE8Q86YQ8 564 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 CEP112Q8N8E3 955 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 ANKRD52Q8NB46 1076 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 MSANTD4Q8NCY6 345 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 FEZF2Q8TBJ5 459 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 SLC35F5Q8WV83 523 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 RTP3Q9BQQ7 232 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 NRDE2Q9H7Z3 1164 aa24.5■■□□□ 1.51
SDF4-202ENST00000360001 PDE4CQ08493 712 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 XYLT1Q86Y38 959 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 HNRNPABQ99729 332 aaKnown RBP24.49■■□□□ 1.51
SDF4-202ENST00000360001 SYT15Q9BQS2 421 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 SYNCQ9H7C4 482 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 CRTAC1Q9NQ79 661 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 RNF216Q9NWF9 866 aaPredicted RBP24.49■■□□□ 1.51
SDF4-202ENST00000360001 DSEQ9UL01 958 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 DDX3YO15523 660 aaKnown RBP24.49■■□□□ 1.51
SDF4-202ENST00000360001 RPL7AP62424 266 aaKnown RBP24.49■■□□□ 1.51
SDF4-202ENST00000360001 PMF1Q6P1K2 205 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 UBE2Q1Q7Z7E8 422 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 FUKQ8N0W3 1084 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 CDH9Q9ULB4 789 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 PRG3Q9Y2Y8 225 aaPredicted RBP24.49■■□□□ 1.51
SDF4-202ENST00000360001 LTBP2Q14767 1821 aa24.49■■□□□ 1.51
SDF4-202ENST00000360001 TMEM191CA6NGB0 347 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 MYO1FO00160 1098 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 PDE2AO00408 941 aaPredicted RBP24.48■■□□□ 1.51
SDF4-202ENST00000360001 KCNK3O14649 394 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 TADA3O75528 432 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 BCAT1P54687 386 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 BST2Q10589 180 aaKnown RBP24.48■■□□□ 1.51
SDF4-202ENST00000360001 ZNF268Q14587 947 aaPredicted RBP24.48■■□□□ 1.51
SDF4-202ENST00000360001 MDH1BQ5I0G3 518 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 METTL23Q86XA0 190 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 CD101Q93033 1021 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 SLC4A5Q9BY07 1137 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 ST7Q9NRC1 585 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 WDR35Q9P2L0 1181 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 HCSTQ9UBK5 93 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 PCDHB8Q9UN66 801 aa24.48■■□□□ 1.51
SDF4-202ENST00000360001 CSF2RAP15509 400 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 PAQR9Q6ZVX9 377 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 STK32AQ8WU08 396 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 MCEEQ96PE7 176 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 MRPL9Q9BYD2 267 aaKnown RBP24.47■■□□□ 1.51
SDF4-202ENST00000360001 PRDM10Q9NQV6 1147 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 ARHGEF37A1IGU5 675 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 TBKBP1A7MCY6 615 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 E5RJQ4 531 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 GOLGA8SH3BPF8 625 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 CES2O00748 559 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 PROSCO94903 275 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 EN2P19622 333 aaPredicted RBP24.47■■□□□ 1.51
SDF4-202ENST00000360001 TYMPP19971 482 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 PCSK1P29120 753 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 RGS7P49802 495 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 IPO4Q8TEX9 1081 aaKnown RBP24.47■■□□□ 1.51
SDF4-202ENST00000360001 MCRS1Q96EZ8 462 aa24.47■■□□□ 1.51
SDF4-202ENST00000360001 MYBPHLA2RUH7 354 aa24.46■■□□□ 1.51
SDF4-202ENST00000360001 NRP1O14786 923 aa24.46■■□□□ 1.51
SDF4-202ENST00000360001 RAG1P15918 1043 aa24.46■■□□□ 1.51
SDF4-202ENST00000360001 TAP1Q03518 808 aa24.46■■□□□ 1.51
SDF4-202ENST00000360001 UBE2Q2Q8WVN8 375 aa24.46■■□□□ 1.51
SDF4-202ENST00000360001 ACBD6Q9BR61 282 aa24.46■■□□□ 1.51
SDF4-202ENST00000360001 SIGLEC16A6NMB1 481 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 MIF4GDA9UHW6 222 aaKnown RBP24.45■■□□□ 1.51
SDF4-202ENST00000360001 CLDN5O00501 218 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 SPOPO43791 374 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 GABBR2O75899 941 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 CKAP4Q07065 602 aaKnown RBP24.45■■□□□ 1.51
SDF4-202ENST00000360001 OVOS1Q6IE37 1185 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 MFSD5Q6N075 450 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 TMEM110Q86TL2 294 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 KRT35Q92764 455 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 MS4A14Q96JA4 679 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 PBKQ96KB5 322 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 SELENOOQ9BVL4 669 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 B3GNT5Q9BYG0 378 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 EHD2Q9NZN4 543 aa24.45■■□□□ 1.51
SDF4-202ENST00000360001 ABHD14A-ACY1A0A1B0GW23 586 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 PIK3R2O00459 728 aa24.45■■□□□ 1.5
SDF4-202ENST00000360001 UPP2O95045 317 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms