RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PMPCBO75439 489 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 CORO7P57737 925 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 C11orf88Q6PI97 169 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 ERP44Q9BS26 406 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 KLHL31Q9H511 634 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 EIF3LQ9Y262 564 aaKnown RBP16.65■□□□□ 0.26
COL18A1-203ENST00000359759 SUPT7LO94864 414 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 TXNP10599 105 aaKnown RBP16.65■□□□□ 0.26
COL18A1-203ENST00000359759 PDHBP11177 359 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 KYAT1Q16773 422 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 TFB1MQ8WVM0 346 aaKnown RBP16.65■□□□□ 0.26
COL18A1-203ENST00000359759 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.65■□□□□ 0.263e-7■■■□□ 17.1
COL18A1-203ENST00000359759 DAPK2Q9UIK4 370 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 LTKP29376 864 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 PTGER2P43116 358 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 EFNA5P52803 228 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 SCUBE1Q8IWY4 988 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 MAGED4Q96JG8 741 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 AP4S1Q9Y587 144 aa16.65■□□□□ 0.26
COL18A1-203ENST00000359759 SYNMO15061 1565 aa16.64■□□□□ 0.26
COL18A1-203ENST00000359759 NCAM1P13591 858 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 ORC2Q13416 577 aaPredicted RBP16.64■□□□□ 0.25
COL18A1-203ENST00000359759 PTK6Q13882 451 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 FAM117BQ6P1L5 589 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 VPS37AQ8NEZ2 397 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 KRT35Q92764 455 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 CATSPERBQ9H7T0 1116 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 MYMKA6NI61 221 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 PRRG1O14668 218 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 PDK1Q15118 436 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 SGSM1Q2NKQ1 1148 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 AKIRIN2Q53H80 203 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 ATP6V1HQ9UI12 483 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 RRM2P31350 389 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 SETD3Q86TU7 594 aaPredicted RBP16.64■□□□□ 0.25
COL18A1-203ENST00000359759 USP13Q92995 863 aaPredicted RBP16.64■□□□□ 0.25
COL18A1-203ENST00000359759 PARVBQ9HBI1 364 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 ANKARQ7Z5J8 1434 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 TRAF2Q12933 501 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 MAPK11Q15759 364 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 DGKKQ5KSL6 1271 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 TRIM65Q6PJ69 517 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 BLOC1S5Q8TDH9 187 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 UNKQ9C0B0 810 aaKnown RBP16.64■□□□□ 0.25
COL18A1-203ENST00000359759 REXO4Q9GZR2 422 aaKnown RBP16.64■□□□□ 0.25
COL18A1-203ENST00000359759 NMRK2Q9NPI5 230 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 TMEM191CA6NGB0 347 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 TRIM24O15164 1050 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 FYNP06241 537 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 DARSP14868 501 aaKnown RBP16.64■□□□□ 0.25
COL18A1-203ENST00000359759 MTMR2Q13614 643 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 MFSD14CQ5VZR4 134 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 CELF1Q92879 486 aaKnown RBP16.64■□□□□ 0.25
COL18A1-203ENST00000359759 CRLS1Q9UJA2 301 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 SH3BP1Q9Y3L3 701 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 WDR19Q8NEZ3 1342 aa16.64■□□□□ 0.25
COL18A1-203ENST00000359759 APOA4P06727 396 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 KPNB1Q14974 876 aaKnown RBP16.63■□□□□ 0.25
COL18A1-203ENST00000359759 CASP10Q92851 521 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 ILKAPQ9H0C8 392 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-203ENST00000359759 ITIH6Q6UXX5 1313 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 HLA-DRAP01903 254 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 ARMC6Q6NXE6 501 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 ADSSL1Q8N142 457 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 TC2NQ8N9U0 490 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 ALG6Q9Y672 507 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 TRIM43BA6NCK2 446 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 NDUFB5O43674 189 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 MAPK10P53779 464 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 CNTN1Q12860 1018 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 NFYCQ13952 458 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 REXO1L1PQ8IX06 675 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 DDI1Q8WTU0 396 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 KLHL4Q9C0H6 718 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 UTP6Q9NYH9 597 aaKnown RBP16.63■□□□□ 0.25
COL18A1-203ENST00000359759 WDR35Q9P2L0 1181 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 TRMT6Q9UJA5 497 aaKnown RBP16.63■□□□□ 0.25
COL18A1-203ENST00000359759 TMA7Q9Y2S6 64 aaKnown RBP16.63■□□□□ 0.25
COL18A1-203ENST00000359759 TGM2P21980 687 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 SCTRP47872 440 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 HIST2H2ACQ16777 129 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-203ENST00000359759 CACHD1Q5VU97 1274 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 HIST2H2AA3Q6FI13 130 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 RDM1Q8NG50 284 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 ATG4AQ8WYN0 398 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 FHDC1Q9C0D6 1143 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-203ENST00000359759 PCNAP12004 261 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 FAM83EQ2M2I3 478 aa16.63■□□□□ 0.25
COL18A1-203ENST00000359759 CINPQ9BW66 212 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-203ENST00000359759 TNPO2O14787 897 aaKnown RBP16.62■□□□□ 0.25
COL18A1-203ENST00000359759 SOAT2O75908 522 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 GSSP48637 474 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 EIF2B2P49770 351 aaKnown RBP16.62■□□□□ 0.25
COL18A1-203ENST00000359759 MMRN1Q13201 1228 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 TYW3Q6IPR3 259 aaKnown RBP16.62■□□□□ 0.25
COL18A1-203ENST00000359759 NUDT18Q6ZVK8 323 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 MIEF2Q96C03 454 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms