RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ABHD10Q9NUJ1 306 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 NOCTQ9UK39 431 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 VCANP13611 3396 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 ABLIM3O94929 683 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 C1RP00736 705 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 CD19P15391 556 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 NDUFV1P49821 464 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 ROR1Q01973 937 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 ARID5AQ03989 594 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 NFE2Q16621 373 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 MEA1Q16626 185 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 PPP1R26Q5T8A7 1209 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 HGSNATQ68CP4 663 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 WDR59Q6PJI9 974 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 NOP9Q86U38 636 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 FUKQ8N0W3 1084 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 ZNF461Q8TAF7 563 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 EPS8L1Q8TE68 723 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 MRPL38Q96DV4 380 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 PANX2Q96RD6 677 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 EMILIN2Q9BXX0 1053 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 B3GNT5Q9BYG0 378 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 THEGQ9P2T0 379 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 PCDHGC5Q9Y5F6 944 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 WDR27A2RRH5 827 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 O00370 1275 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 SKILP12757 684 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 CPB1P15086 417 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 ARPP19P56211 112 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 GSDMDP57764 484 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 CDK17Q00537 523 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 STILQ15468 1287 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 CCDC85BQ15834 202 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 PTPROQ16827 1216 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 SLC39A12Q504Y0 691 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 TPGS2Q68CL5 300 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 LILRA6Q6PI73 481 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 GPIHBP1Q8IV16 184 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 C2orf15Q8WU43 125 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 MYLPFQ96A32 169 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 SYT11Q9BT88 431 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 LMCD1Q9NZU5 365 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 AFF4Q9UHB7 1163 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
NIF3L1-201ENST00000359683 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 THAP12O43422 761 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 MED7O43513 233 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 VNN2O95498 520 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 SERPING1P05155 500 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 ADH1AP07327 375 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 CCDC130P13994 396 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 ATF2P15336 505 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 CHRNB2P17787 502 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 FECHP22830 423 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 CA8P35219 290 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 PDE6CP51160 858 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 CDR2Q01850 454 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 KLHL30Q0D2K2 578 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 CFAP221Q4G0U5 840 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 C4orf50Q6ZRC1 276 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 GLYCTKQ8IVS8 523 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 SLC2A14Q8TDB8 520 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 FUBP3Q96I24 572 aaKnown RBP eCLIP13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 PPP1R9BQ96SB3 815 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 HAUS4Q9H6D7 363 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 ABCB6Q9NP58 842 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 ARHGAP20Q9P2F6 1191 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 HSFX1Q9UBD0 423 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 PCDHGC3Q9UN70 934 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 PCDHB5Q9Y5E4 795 aa13.16□□□□□ -0.3
NIF3L1-201ENST00000359683 TRANK1O15050 2925 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 MTMR11A4FU01 709 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 CLDN5O00501 218 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 CSPG5O95196 566 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 POU3F3P20264 500 aaPredicted RBP13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 KLRC2P26717 231 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 PKDCCQ504Y2 493 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 ZNF571Q7Z3V5 609 aaPredicted RBP13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 PALB2Q86YC2 1186 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 SPATA2LQ8IUW3 424 aaPredicted RBP13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 ANKRD52Q8NB46 1076 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 ATAD1Q8NBU5 361 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 OLIG1Q8TAK6 271 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 SPPL2BQ8TCT7 592 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms