RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 RBM43Q6ZSC3 357 aaKnown RBP9.69□□□□□ -0.86
UPF2-202ENST00000357604 DENND5BQ6ZUT9 1274 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 ABCC13Q9NSE7 274 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 ZDHHC7Q9NXF8 308 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 DDX56Q9NY93 547 aaKnown RBP9.69□□□□□ -0.86
UPF2-202ENST00000357604 LOXHD1Q8IVV2 1947 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 H3BRJ5 948 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 TBC1D4O60343 1298 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 PROZP22891 400 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 CKAP4Q07065 602 aaKnown RBP9.69□□□□□ -0.86
UPF2-202ENST00000357604 CLLU1OSQ5K130 101 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 FAM102AQ5T9C2 384 aaPredicted RBP9.69□□□□□ -0.86
UPF2-202ENST00000357604 PDCL2Q8N4E4 241 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 MYCBPAPQ8TBZ2 947 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 TAS1R2Q8TE23 839 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 SERPINB11Q96P15 392 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 PPP1R10Q96QC0 940 aaKnown RBP9.69□□□□□ -0.86
UPF2-202ENST00000357604 DNMT3LQ9UJW3 386 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 AMFRQ9UKV5 643 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 ADH1CP00326 375 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 C8AP07357 584 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 UPP1Q16831 310 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 CEP128Q6ZU80 1094 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 HOOK3Q86VS8 718 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 DAW1Q8N136 415 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 EFHBQ8N7U6 833 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 KLHL5Q96PQ7 755 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 PANX2Q96RD6 677 aa9.69□□□□□ -0.86
UPF2-202ENST00000357604 DSG1Q02413 1049 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 AGMOQ6ZNB7 445 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 TRIM59Q8IWR1 403 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 CCAR2Q8N163 923 aaKnown RBP9.68□□□□□ -0.86
UPF2-202ENST00000357604 IRGQQ8WZA9 623 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 EPAS1Q99814 870 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 GDAP2Q9NXN4 497 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.68□□□□□ -0.86
UPF2-202ENST00000357604 GRIN2DO15399 1336 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 LINC01553A4QN01 128 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 ZNF263O14978 683 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 PMM2O15305 246 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 UCHL3P15374 230 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 PFKLP17858 780 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 PON1P27169 355 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 GATMP50440 423 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 GPC5P78333 572 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 RAD51Q06609 339 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 UBXN11Q5T124 520 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 ERGIC2Q96RQ1 377 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 SLC25A13Q9UJS0 675 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 PLXNA1Q9UIW2 1896 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 PABPN1LA6NDY0 278 aaKnown RBP9.68□□□□□ -0.86
UPF2-202ENST00000357604 TTLL13PA6NNM8 815 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 ARHGAP6O43182 974 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 TGFB1I1O43294 461 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 ZACNQ401N2 412 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 TRIM65Q6PJ69 517 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 SLC7A14Q8TBB6 771 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 CATSPERBQ9H7T0 1116 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 F5H5T6 163 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 NPR3P17342 541 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 BRD2P25440 801 aaKnown RBP9.68□□□□□ -0.86
UPF2-202ENST00000357604 HOXC8P31273 242 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 LRRC32Q14392 662 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 EEF2KMTQ96G04 330 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 PRDM12Q9H4Q4 367 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 THEGQ9P2T0 379 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 HSFX1Q9UBD0 423 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
UPF2-202ENST00000357604 LUC7L3O95232 432 aaKnown RBP9.67□□□□□ -0.86
UPF2-202ENST00000357604 ZFXP17010 805 aaPredicted RBP9.67□□□□□ -0.86
UPF2-202ENST00000357604 ETFBP38117 255 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 GUCY2FP51841 1108 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 TKTL1P51854 596 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 LILRA4P59901 499 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 C1orf131Q8NDD1 294 aaKnown RBP9.67□□□□□ -0.86
UPF2-202ENST00000357604 PGLYRP2Q96PD5 576 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 ZCWPW1Q9H0M4 648 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 SMYD3Q9H7B4 428 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 PTPRHQ9HD43 1115 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 DYRK4Q9NR20 520 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 A0A1B0GTH6 734 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 NFATC1O95644 943 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 C4BPAP04003 597 aaKnown RBP9.67□□□□□ -0.86
UPF2-202ENST00000357604 ERBB2P04626 1255 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 CASP14P31944 242 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 MAGEA11P43364 429 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 CCDC14Q49A88 953 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 GANCQ8TET4 914 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 TELO2Q9Y4R8 837 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 PTPRFP10586 1907 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 XPO1O14980 1071 aaKnown RBP9.67□□□□□ -0.86
UPF2-202ENST00000357604 HSF2BPO75031 334 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 PPP1R37O75864 691 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 BDNFP23560 247 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 ACAT1P24752 427 aaKnown RBP9.67□□□□□ -0.86
UPF2-202ENST00000357604 PLA2G4AP47712 749 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 PASD1Q8IV76 773 aa9.67□□□□□ -0.86
UPF2-202ENST00000357604 KCTD6Q8NC69 237 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms