RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SLC39A12Q504Y0 691 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 VSTM4Q8IW00 320 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 RNF148Q8N7C7 305 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 FAM162AQ96A26 154 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 TGS1Q96RS0 853 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 INPP4BO15327 924 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 STX7O15400 261 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 GUCY1A3Q02108 690 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ZBTB17Q13105 803 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SV2CQ496J9 727 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 MAP3K21Q5TCX8 1036 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 DAB2IPQ5VWQ8 1189 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 NDRG1Q92597 394 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 MAGEB5Q9BZ81 275 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ACP6Q9NPH0 428 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SOHLH2Q9NX45 425 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ZNF711Q9Y462 761 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 UBXN8O00124 270 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 GPR182O15218 404 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 INMTO95050 263 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 ADORA2AP29274 412 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 SEC13P55735 322 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 GRIK5Q16478 980 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 DSG4Q86SJ6 1040 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 KIRREL3Q8IZU9 778 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 OR10G6Q8NH81 332 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 NEDD1Q8NHV4 660 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 CSGALNACT1Q8TDX6 532 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 GPRASP2Q96D09 838 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 CYP2S1Q96SQ9 504 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 TUBE1Q9UJT0 475 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 CRYL1Q9Y2S2 319 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 F8W810 466 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 KRT37O76014 449 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 TMCC1O94876 653 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 ERVK-10P10266 1014 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 PYGBP11216 843 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 MLNP12872 115 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 COMTP21964 271 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 SFNP31947 248 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 NDUFV1P49821 464 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 EIF3BP55884 814 aaKnown RBP7.65□□□□□ -1.18
VPS13A-202ENST00000357409 DDI2Q5TDH0 399 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 LONP2Q86WA8 852 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 WNK4Q96J92 1243 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 ZNF560Q96MR9 790 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 UCHL3P15374 230 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 RGS2P41220 211 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 CLEC16AQ2KHT3 1053 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 SCUBE3Q8IX30 993 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 MKNK1Q9BUB5 465 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 ARMC7Q9H6L4 198 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 WWOXQ9NZC7 414 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 CEP72Q9P209 647 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 VANGL2Q9ULK5 521 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 NEU2Q9Y3R4 380 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 SRP72O76094 671 aaKnown RBP7.65□□□□□ -1.18
VPS13A-202ENST00000357409 CAP2P40123 477 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 C6orf118Q5T5N4 469 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 CFAP52Q8N1V2 620 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 GRIN3AQ8TCU5 1115 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 PHF21AQ96BD5 680 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 MRFAP1L1Q96HT8 127 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 GTF3C4Q9UKN8 822 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 PLA2G4CQ9UP65 541 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 PCDHGA4Q9Y5G9 962 aa7.65□□□□□ -1.18
VPS13A-202ENST00000357409 ENO4A6NNW6 628 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 PHF20L1A8MW92 1017 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 XPO1O14980 1071 aaKnown RBP7.65□□□□□ -1.19
VPS13A-202ENST00000357409 JCHAINP01591 159 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 CSHL1Q14406 222 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 DDR2Q16832 855 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 RHOT2Q8IXI1 618 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.65□□□□□ -1.19
VPS13A-202ENST00000357409 LPCAT1Q8NF37 534 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 ASAP3Q8TDY4 903 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 TUBGCP3Q96CW5 907 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 RUNDC3BQ96NL0 473 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 KDM4CQ9H3R0 1056 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 THP07101 528 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 CHI3L1P36222 383 aaPredicted RBP7.65□□□□□ -1.19
VPS13A-202ENST00000357409 TRPC1P48995 793 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 TMEM132BQ14DG7 1078 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 P2RX7Q99572 595 aaKnown RBP7.65□□□□□ -1.19
VPS13A-202ENST00000357409 EFHD1Q9BUP0 239 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 TRIM4Q9C037 500 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.65□□□□□ -1.19
VPS13A-202ENST00000357409 CTNNB1P35222 781 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 CXCR3P49682 368 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 RNF19BQ6ZMZ0 732 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 CNBD2Q96M20 576 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 MYOM2P54296 1465 aa7.65□□□□□ -1.19
VPS13A-202ENST00000357409 STXBP3O00186 592 aa7.64□□□□□ -1.19
VPS13A-202ENST00000357409 TAF6P49848 677 aa7.64□□□□□ -1.19
VPS13A-202ENST00000357409 LRRC63Q05C16 580 aa7.64□□□□□ -1.19
VPS13A-202ENST00000357409 AKIRIN2Q53H80 203 aa7.64□□□□□ -1.19
VPS13A-202ENST00000357409 CROCCP2Q86T23 111 aa7.64□□□□□ -1.19
VPS13A-202ENST00000357409 HEATR4Q86WZ0 1026 aa7.64□□□□□ -1.19
VPS13A-202ENST00000357409 TMEM121Q9BTD3 319 aa7.64□□□□□ -1.19
VPS13A-202ENST00000357409 RUSC1Q9BVN2 902 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms