RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 COILP38432 576 aaPredicted RBP13.34□□□□□ -0.27
SMC4-202ENST00000357388 GRIK1P39086 918 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 ILF2Q12905 390 aaKnown RBP13.34□□□□□ -0.27
SMC4-202ENST00000357388 FAM83EQ2M2I3 478 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 PDZK1Q5T2W1 519 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 ARMC6Q6NXE6 501 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 SHC4Q6S5L8 630 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 RMND5BQ96G75 393 aaPredicted RBP13.34□□□□□ -0.27
SMC4-202ENST00000357388 SPATA16Q9BXB7 569 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 UBXN6Q9BZV1 441 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 VTA1Q9NP79 307 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 MROH7-TTC4A0A0A0MT08 1334 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 DFFAO00273 331 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 IER5Q5VY09 327 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 ZFP1Q6P2D0 407 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 CCSER1Q9C0I3 900 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 SPON1Q9HCB6 807 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 C6orf203Q9P0P8 240 aaPredicted RBP13.34□□□□□ -0.27
SMC4-202ENST00000357388 MCM8Q9UJA3 840 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 HAO1Q9UJM8 370 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 PKP3Q9Y446 797 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 GYS1P13807 737 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 C11orf88Q6PI97 169 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 ENKURQ8TC29 256 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 OSCP1Q8WVF1 389 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 C1orf50Q9BV19 199 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 GOLPH3Q9H4A6 298 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 SMARCAD1Q9H4L7 1026 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 NMRK1Q9NWW6 199 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 SNX13Q9Y5W8 968 aa13.34□□□□□ -0.27
SMC4-202ENST00000357388 BIRC5O15392 142 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 P4HA2O15460 535 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 FDFT1P37268 417 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 CACNB3P54284 484 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 SLC29A2Q14542 456 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 LINC00523Q86TU6 105 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 SETD9Q8NE22 299 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 YIPF2Q9BWQ6 316 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 FUT8Q9BYC5 575 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 AGO2Q9UKV8 859 aaKnown RBP13.33□□□□□ -0.27
SMC4-202ENST00000357388 ATP7BP35670 1465 aa13.33□□□□□ -0.27
SMC4-202ENST00000357388 ARAP3Q8WWN8 1544 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 LOC100653049A0A140TA62 436 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 H7C1W4 665 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 KRT34O76011 436 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 EYA4O95677 639 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 ABCB1P08183 1280 aaPredicted RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 NPEPPSP55786 919 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 OTUD4Q01804 1114 aaKnown RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 DNAJC3Q13217 504 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 ALX1Q15699 326 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 UGT3A1Q6NUS8 523 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 PI16Q6UXB8 463 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 ZBTB49Q6ZSB9 765 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 PAIP1Q9H074 479 aaKnown RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 C15orf41Q9Y2V0 281 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 F8W810 466 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 TM9SF1O15321 606 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 CPA2P48052 419 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 ATP1A4Q13733 1029 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 ARHGEF7Q14155 803 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 CYP4Z2PQ8N1L4 340 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 TC2NQ8N9U0 490 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 C7orf25Q9BPX7 421 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 RPAP3Q9H6T3 665 aaPredicted RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 PHGDHO43175 533 aaKnown RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 TSPAN9O75954 239 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 TXNP10599 105 aaKnown RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 H2AFXP16104 143 aaPredicted RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 CNTN1Q12860 1018 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 EPHA7Q15375 998 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 COBLL1Q53SF7 1204 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 TRIM65Q6PJ69 517 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 MICALL2Q8IY33 904 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 DCP1BQ8IZD4 617 aaKnown RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 ATPAF2Q8N5M1 289 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 MED15Q96RN5 788 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 SLC38A7Q9NVC3 462 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 BARHL2Q9NY43 387 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 WHRNQ9P202 907 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 PIN4Q9Y237 131 aaKnown RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 CYP26A1O43174 497 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 DGKIO75912 1065 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 SULT1E1P49888 294 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 EDRF1Q3B7T1 1238 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 NAPEPLDQ6IQ20 393 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 MB21D2Q8IYB1 491 aaPredicted RBP13.33□□□□□ -0.28
SMC4-202ENST00000357388 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 STK39Q9UEW8 545 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 SLC30A1Q9Y6M5 507 aa13.33□□□□□ -0.28
SMC4-202ENST00000357388 F5H6K3 240 aa13.32□□□□□ -0.28
SMC4-202ENST00000357388 KLRC3Q07444 240 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms