RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GPR62Q9BZJ7 368 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 AVENQ9NQS1 362 aaPredicted RBP19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 TJP2Q9UDY2 1190 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 CDH9Q9ULB4 789 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 NLRC5Q86WI3 1866 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 MYBPHLA2RUH7 354 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 TULP2O00295 520 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 PALMO75781 387 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 MYBL1P10243 752 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 ADORA2BP29275 332 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 HADHBP55084 474 aaKnown RBP19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 MDH1BQ5I0G3 518 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 TMEM240Q5SV17 173 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 PAQR9Q6ZVX9 377 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 ERICH1Q86X53 443 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 FUKQ8N0W3 1084 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 LRRC57Q8N9N7 239 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 OR10T2Q8NGX3 314 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 TRIM11Q96F44 468 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 CPXM1Q96SM3 734 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 PTPRDP23468 1912 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 ARHGEF37A1IGU5 675 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 MTA2O94776 668 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 ATP1A1P05023 1023 aaKnown RBP19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 PCSK1P29120 753 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 CDR1P51861 262 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 PDCLQ13371 301 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 ANKRD52Q8NB46 1076 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 TMEM209Q96SK2 561 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 PKMYT1Q99640 499 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 HNRNPABQ99729 332 aaKnown RBP19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 ACBD6Q9BR61 282 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 NUP85Q9BW27 656 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 B3GNT5Q9BYG0 378 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 DNAI2Q9GZS0 605 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 GOLPH3Q9H4A6 298 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 CXXC1Q9P0U4 656 aaPredicted RBP19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 CTTNBP2NLQ9P2B4 639 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 CDC23Q9UJX2 597 aa19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 ZMYND8Q9ULU4 1186 aaPredicted RBP19.2■□□□□ 0.66
SMARCD3-202ENST00000356800 TCRBV5S1A1TA0A578 114 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 ZBBXA8MT70 800 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 CLDN5O00501 218 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 ENC1O14682 589 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 TRAPPC3O43617 180 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 GTF2F1P35269 517 aaKnown RBP eCLIP19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 YWHAHQ04917 246 aaPredicted RBP19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 PDE4CQ08493 712 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 COL13A1Q5TAT6 717 aaPredicted RBP19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 CYP4A22Q5TCH4 519 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 SLC35F5Q8WV83 523 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 ABHD8Q96I13 439 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 HTATIP2Q9BUP3 242 aa19.19■□□□□ 0.66
SMARCD3-202ENST00000356800 BUB1BO60566 1050 aaPredicted RBP19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 GABBR2O75899 941 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 OAZ2O95190 189 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 EFEMP2O95967 443 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 ERBB2P04626 1255 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 CALB1P05937 261 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 PRLRP16471 622 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 INTS6LQ5JSJ4 861 aaKnown RBP19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 LIN9Q5TKA1 542 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 FAM171A1Q5VUB5 890 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 PLEKHA7Q6IQ23 1121 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 PMF1Q6P1K2 205 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 FUT10Q6P4F1 479 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 FAM171BQ6P995 826 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 SLFN11Q7Z7L1 901 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 CMTR2Q8IYT2 770 aaKnown RBP19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 MYCBPAPQ8TBZ2 947 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 ZNF564Q8TBZ8 553 aaPredicted RBP19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 PCED1BQ96HM7 432 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 B3GALT6Q96L58 329 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 UVRAGQ9P2Y5 699 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 HESX1Q9UBX0 185 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 SAR1BQ9Y6B6 198 aa19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 MRPL42Q9Y6G3 142 aaKnown RBP19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 SF3B1O75533 1304 aaKnown RBP eCLIP19.18■□□□□ 0.66
SMARCD3-202ENST00000356800 SYN3O14994 580 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 SLU7O95391 586 aaKnown RBP19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 SETSIPP0DME0 302 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 FGFR3P22607 806 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 GABRB2P47870 512 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 ALDH7A1P49419 539 aaKnown RBP19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 BCAT1P54687 386 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 MAMLD1Q13495 774 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 LRRTM3Q86VH5 581 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 SYCE1Q8N0S2 351 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 THEM5Q8N1Q8 247 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 TRIM7Q9C029 511 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 TMLHEQ9NVH6 421 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 GJB6O95452 261 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 FTCDO95954 541 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 RGS7P49802 495 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 PLCB3Q01970 1234 aa19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 BST2Q10589 180 aaKnown RBP19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 MRPL58Q14197 206 aaKnown RBP19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 BTG3Q14201 252 aaPredicted RBP19.17■□□□□ 0.66
SMARCD3-202ENST00000356800 VARS2Q5ST30 1063 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms