RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 C3orf62Q6ZUJ4 267 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 RELL1Q8IUW5 271 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 KCTD6Q8NC69 237 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 ERP27Q96DN0 273 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 TTC25Q96NG3 672 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 TMEM237Q96Q45 408 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 PARP14Q460N5 1801 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 IGKV6D-21A0A0A0MT36 114 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 TNNC2P02585 160 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 ABHD2P08910 425 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 HOXC6P09630 235 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 SLC8A1P32418 973 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 CLCN3P51790 818 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 PPP1R15BQ5SWA1 713 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 UNC45BQ8IWX7 931 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 ANKLE1Q8NAG6 615 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 LRRC8CQ8TDW0 803 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 MYLK2Q9H1R3 596 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 CPSF3Q9UKF6 684 aaKnown RBP20.55■□□□□ 0.88
COL13A1-201ENST00000354547 ALOX15BO15296 676 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 EFNA5P52803 228 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 MYO1EQ12965 1108 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 MKRN3Q13064 507 aaKnown RBP20.55■□□□□ 0.88
COL13A1-201ENST00000354547 ZNF449Q6P9G9 518 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 ZC3H18Q86VM9 953 aaKnown RBP20.55■□□□□ 0.88
COL13A1-201ENST00000354547 KIRREL3Q8IZU9 778 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 COPS5Q92905 334 aa20.55■□□□□ 0.88
COL13A1-201ENST00000354547 DDX56Q9NY93 547 aaKnown RBP20.55■□□□□ 0.88
COL13A1-201ENST00000354547 DRG1Q9Y295 367 aaKnown RBP20.55■□□□□ 0.88
COL13A1-201ENST00000354547 MAP3K6O95382 1288 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 EIF4BP23588 611 aaKnown RBP20.54■□□□□ 0.88
COL13A1-201ENST00000354547 TARSP26639 723 aaKnown RBP20.54■□□□□ 0.88
COL13A1-201ENST00000354547 NEDD9Q14511 834 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 SEPT7Q16181 437 aaKnown RBP20.54■□□□□ 0.88
COL13A1-201ENST00000354547 RAB6CQ53S08 254 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 LRRC38Q5VT99 294 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 LVRNQ6Q4G3 990 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 GBP7Q8N8V2 638 aaPredicted RBP20.54■□□□□ 0.88
COL13A1-201ENST00000354547 LRRN4Q8WUT4 740 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 CPT1BQ92523 772 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 ANKRD36BP1Q96IX9 119 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 TACO1Q9BSH4 297 aaKnown RBP20.54■□□□□ 0.88
COL13A1-201ENST00000354547 RAB6CQ9H0N0 254 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 XYLT2Q9H1B5 865 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 PCDH9Q9HC56 1237 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 TNS1Q9HBL0 1735 aaKnown RBP20.54■□□□□ 0.88
COL13A1-201ENST00000354547 GRAP2O75791 330 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 ITGAVP06756 1048 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 RPL22P35268 128 aaKnown RBP20.54■□□□□ 0.88
COL13A1-201ENST00000354547 MMRN1Q13201 1228 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 SH3PXD2AQ5TCZ1 1133 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 PPP1R2P3Q6NXS1 205 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 NPNTQ6UXI9 565 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 FBXO36Q8NEA4 188 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 CHST13Q8NET6 341 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 UBA3Q8TBC4 463 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 N4BP2L2Q92802 583 aaPredicted RBP20.54■□□□□ 0.88
COL13A1-201ENST00000354547 TWNKQ96RR1 684 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 SMYD3Q9H7B4 428 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 ACTL7BQ9Y614 415 aa20.54■□□□□ 0.88
COL13A1-201ENST00000354547 LOC102724159A0A0B4J2E5 919 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 PWP2Q15269 919 aaKnown RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 CDO1Q16878 200 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 ATF7IP2Q5U623 682 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 CEP128Q6ZU80 1094 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 PALM2Q8IXS6 379 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 RIBC1Q8N443 379 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 SLC35B2Q8TB61 432 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 FBF1Q8TES7 1133 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 NKD2Q969F2 451 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 FOXP3Q9BZS1 431 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 MINDY3Q9H8M7 445 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 CLUHO75153 1309 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 KAT6AQ92794 2004 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 C3orf70A6NLC5 250 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 FGFR1P11362 822 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 OVGP1Q12889 678 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 WLSQ5T9L3 541 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 IER5Q5VY09 327 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 DRICH1Q6PGQ1 229 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 PSMC3IPQ9P2W1 217 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 HAO1Q9UJM8 370 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 DOCK1Q14185 1865 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 ERBB2P04626 1255 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 NFICP08651 508 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 KDELR1P24390 212 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 POLR2BP30876 1174 aaKnown RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 AP3M2P53677 418 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 SLC25A11Q02978 314 aaKnown RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 HADHQ16836 314 aaKnown RBP20.53■□□□□ 0.88
COL13A1-201ENST00000354547 ZNF667Q5HYK9 610 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 DENND1AQ8TEH3 1009 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 SDCBP2Q9H190 292 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 CHMP2BQ9UQN3 213 aa20.53■□□□□ 0.88
COL13A1-201ENST00000354547 ADRA1DP25100 572 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 YWHAEP62258 255 aaKnown RBP20.52■□□□□ 0.88
COL13A1-201ENST00000354547 SETDB1Q15047 1291 aa20.52■□□□□ 0.88
COL13A1-201ENST00000354547 MYCBPQ99417 103 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms