RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 KRT7P08729 469 aa22.92■■□□□ 1.26
SHMT1-202ENST00000352886 GHRP10912 638 aa22.92■■□□□ 1.26
SHMT1-202ENST00000352886 RNASEH2BQ5TBB1 312 aaKnown RBP22.92■■□□□ 1.26
SHMT1-202ENST00000352886 XYLT1Q86Y38 959 aa22.92■■□□□ 1.26
SHMT1-202ENST00000352886 SLC4A11Q8NBS3 891 aa22.92■■□□□ 1.26
SHMT1-202ENST00000352886 FNIP1Q8TF40 1166 aa22.92■■□□□ 1.26
SHMT1-202ENST00000352886 NFKBIZQ9BYH8 718 aa22.92■■□□□ 1.26
SHMT1-202ENST00000352886 PCDH9Q9HC56 1237 aa22.92■■□□□ 1.26
SHMT1-202ENST00000352886 SNX3O60493 162 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 PHKA2P46019 1235 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 MOGSQ13724 837 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 HADHQ16836 314 aaKnown RBP22.91■■□□□ 1.26
SHMT1-202ENST00000352886 TTC25Q96NG3 672 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 A0A087WZ62 844 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 RASA4BC9J798 803 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 RASA4O43374 803 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 INSRRP14616 1297 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 OSBPP22059 807 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 OTUD4Q01804 1114 aaKnown RBP22.91■■□□□ 1.26
SHMT1-202ENST00000352886 PTPN11Q06124 597 aaPredicted RBP22.91■■□□□ 1.26
SHMT1-202ENST00000352886 GJC2Q5T442 439 aaPredicted RBP22.91■■□□□ 1.26
SHMT1-202ENST00000352886 ACTL9Q8TC94 416 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 CKAP2Q8WWK9 683 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 FDXACB1Q9BRP7 624 aaPredicted RBP22.91■■□□□ 1.26
SHMT1-202ENST00000352886 ELOVL4Q9GZR5 314 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 MROH8Q9H579 483 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 ZSWIM8A7E2V4 1837 aa22.91■■□□□ 1.26
SHMT1-202ENST00000352886 CST8O60676 142 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 PPIL2Q13356 520 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 NUGGCQ68CJ6 796 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 SMYD5Q6GMV2 418 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 CAPN12Q6ZSI9 719 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 RIBC1Q8N443 379 aaPredicted RBP22.9■■□□□ 1.26
SHMT1-202ENST00000352886 CPB2Q96IY4 423 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 C10orf88Q9H8K7 445 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 SLC40A1Q9NP59 571 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 WDR35Q9P2L0 1181 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 EFR3BQ9Y2G0 817 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 CILPO75339 1184 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 GCAP28676 217 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 ARHGEF18Q6ZSZ5 1173 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 ZBED8Q8IZ13 594 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 MAML1Q92585 1016 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 OPTNQ96CV9 577 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 TMEM176AQ96HP8 235 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 NKIRAS1Q9NYS0 192 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 SHOC2Q9UQ13 582 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 ACTL7BQ9Y614 415 aa22.9■■□□□ 1.26
SHMT1-202ENST00000352886 RASSF9O75901 435 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 MICAL2O94851 1124 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 CD48P09326 243 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 KDELR1P24390 212 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 STX2P32856 288 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 AMHR2Q16671 573 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 CXorf38Q8TB03 319 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 PRCCQ92733 491 aaPredicted RBP22.89■■□□□ 1.26
SHMT1-202ENST00000352886 PDZD7Q9H5P4 517 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 PCSK1NQ9UHG2 260 aa22.89■■□□□ 1.26
SHMT1-202ENST00000352886 M0QYV0 167 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 OAS1P00973 400 aaKnown RBP22.89■■□□□ 1.25
SHMT1-202ENST00000352886 MCF2P10911 925 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 GDF10P55107 478 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 GSCP56915 257 aaPredicted RBP22.89■■□□□ 1.25
SHMT1-202ENST00000352886 FAM187BQ17R55 369 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 ARMCX2Q7L311 632 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 TRPM8Q7Z2W7 1104 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 SUGP1Q8IWZ8 645 aaKnown RBP22.89■■□□□ 1.25
SHMT1-202ENST00000352886 CDCA5Q96FF9 252 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 VPS37BQ9H9H4 285 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 AKT3Q9Y243 479 aa22.89■■□□□ 1.25
SHMT1-202ENST00000352886 POC1B-GALNT4F8VUJ3 575 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 GOLGA8MH3BSY2 632 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 LGALS2P05162 132 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 TNFAIP2Q03169 654 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 ARHGAP1Q07960 439 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 PDIA2Q13087 525 aaKnown RBP22.88■■□□□ 1.25
SHMT1-202ENST00000352886 ZNF268Q14587 947 aaPredicted RBP22.88■■□□□ 1.25
SHMT1-202ENST00000352886 CCDC142Q17RM4 750 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 ZNF484Q5JVG2 852 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 BBS12Q6ZW61 710 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 CENPUQ71F23 418 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 CCDC125Q86Z20 511 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 FAXDC2Q96IV6 333 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 HAUS2Q9NVX0 235 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.88■■□□□ 1.25
SHMT1-202ENST00000352886 ASB14A6NK59 587 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 MYO1EQ12965 1108 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 FASTKD5Q7L8L6 764 aaKnown RBP22.88■■□□□ 1.25
SHMT1-202ENST00000352886 DPH6Q7L8W6 267 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 TTC13Q8NBP0 860 aa22.88■■□□□ 1.25
SHMT1-202ENST00000352886 TGS1Q96RS0 853 aaKnown RBP22.88■■□□□ 1.25
SHMT1-202ENST00000352886 USP15Q9Y4E8 981 aaPredicted RBP22.88■■□□□ 1.25
SHMT1-202ENST00000352886 ALOX15BO15296 676 aa22.87■■□□□ 1.25
SHMT1-202ENST00000352886 VTNP04004 478 aa22.87■■□□□ 1.25
SHMT1-202ENST00000352886 POU5F1BQ06416 359 aa22.87■■□□□ 1.25
SHMT1-202ENST00000352886 ZKSCAN8Q15776 578 aaPredicted RBP22.87■■□□□ 1.25
SHMT1-202ENST00000352886 SLC10A6Q3KNW5 377 aa22.87■■□□□ 1.25
SHMT1-202ENST00000352886 ASB7Q9H672 318 aa22.87■■□□□ 1.25
SHMT1-202ENST00000352886 KLC4Q9NSK0 619 aa22.87■■□□□ 1.25
SHMT1-202ENST00000352886 NDC80O14777 642 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms