RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 MMEL1Q495T6 779 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 WDR75Q8IWA0 830 aaKnown RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 PCSK9Q8NBP7 692 aaKnown RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 SHC3Q92529 594 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 EPN3Q9H201 632 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 PSMC3IPQ9P2W1 217 aaPredicted RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 PCDHA3Q9Y5H8 950 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 STIP1P31948 543 aaKnown RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 OTUD4Q01804 1114 aaKnown RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 PAN2Q504Q3 1202 aaKnown RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 MTG1Q9BT17 334 aaPredicted RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 GPATCH2LQ9NWQ4 482 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 CTCFP49711 727 aaPredicted RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 GPR142Q7Z601 462 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 TNFSF13BQ9Y275 285 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 PDE2AO00408 941 aaPredicted RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 TYK2P29597 1187 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 SEPT5Q99719 369 aaPredicted RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 ACO2Q99798 780 aaKnown RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 TUBB6Q9BUF5 446 aa20.26■□□□□ 0.83
RNF38-202ENST00000350199 CICQ96RK0 1608 aaPredicted RBP20.26■□□□□ 0.83
RNF38-202ENST00000350199 MAP3K6O95382 1288 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 PAPOLAP51003 745 aaKnown RBP20.25■□□□□ 0.83
RNF38-202ENST00000350199 BEX3Q00994 111 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 CCNG2Q16589 344 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 C4orf33Q8N1A6 199 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 USP33Q8TEY7 942 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 DDIT4Q9NX09 232 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 CCDC195A0A1B0GUA6 201 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 CCDC160A6NGH7 325 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 SLC8A1P32418 973 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 TNFSF9P41273 254 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 SESN3P58005 492 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 MAPRE1Q15691 268 aaKnown RBP20.25■□□□□ 0.83
RNF38-202ENST00000350199 HSDL1Q3SXM5 330 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 MAP3K21Q5TCX8 1036 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 TAF2Q6P1X5 1199 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 SIAH1Q8IUQ4 282 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 MAGEB5Q9BZ81 275 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 DCTN4Q9UJW0 460 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 BAG2O95816 211 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 NCF2P19878 526 aaPredicted RBP20.25■□□□□ 0.83
RNF38-202ENST00000350199 FSCN1Q16658 493 aaKnown RBP20.25■□□□□ 0.83
RNF38-202ENST00000350199 ATPAF2Q8N5M1 289 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.25■□□□□ 0.83
RNF38-202ENST00000350199 PDGFCQ9NRA1 345 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 WHRNQ9P202 907 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 MROH7Q68CQ1 1323 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 C3orf70A6NLC5 250 aaPredicted RBP20.25■□□□□ 0.83
RNF38-202ENST00000350199 HMBSP08397 361 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 ESRRAP11474 423 aaPredicted RBP20.25■□□□□ 0.83
RNF38-202ENST00000350199 ZACNQ401N2 412 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 ATP6V1E2Q96A05 226 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 LENG9Q96B70 501 aa20.25■□□□□ 0.83
RNF38-202ENST00000350199 G3BP2Q9UN86 482 aaKnown RBP20.25■□□□□ 0.83
RNF38-202ENST00000350199 SMG5Q9UPR3 1016 aaKnown RBP20.25■□□□□ 0.83
RNF38-202ENST00000350199 EGFRP00533 1210 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 PAEPP09466 180 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 TPD52P55327 224 aaPredicted RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 COPS2P61201 443 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 PRAMEF19Q5SWL8 479 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 KDELC2Q7Z4H8 507 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 NT5DC4Q86YG4 428 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 SYT17Q9BSW7 474 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 FRMD8P1Q9BZ68 369 aaPredicted RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 TCP11X1B4DZS4 312 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 GJB1P08034 283 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 BST2Q10589 180 aaKnown RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 PDK2Q15119 407 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 NFIL3Q16649 462 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 MGAT5BQ3V5L5 792 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 TBC1D1Q86TI0 1168 aaPredicted RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 SHCBP1Q8NEM2 672 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 CAVIN3Q969G5 261 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 PPP1R12CQ9BZL4 782 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 UBN1Q9NPG3 1134 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 PRDM5Q9NQX1 630 aaPredicted RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 ABI2Q9NYB9 513 aaPredicted RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 BTBD7Q9P203 1132 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 RPLP2P05387 115 aaKnown RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 ZNF200P98182 395 aaPredicted RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 NUDCD3Q8IVD9 361 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 ELMOD1Q8N336 334 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 OR5B17Q8NGF7 314 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 CCT8L2Q96SF2 557 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 ANGPTL3Q9Y5C1 460 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 BAZ2AQ9UIF9 1905 aaKnown RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 LSP1P33241 339 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 ZNF235Q14590 738 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 EXT2Q93063 718 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 ATXN7L3BQ96GX2 97 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 CDT1Q9H211 546 aa20.24■□□□□ 0.83
RNF38-202ENST00000350199 PPARGC1AQ9UBK2 798 aaKnown RBP20.24■□□□□ 0.83
RNF38-202ENST00000350199 GOLGA8QA0A0J9YX86 632 aa20.23■□□□□ 0.83
RNF38-202ENST00000350199 GOLGA8OA6NCC3 632 aa20.23■□□□□ 0.83
RNF38-202ENST00000350199 GOLGA8NF8WBI6 632 aa20.23■□□□□ 0.83
RNF38-202ENST00000350199 MICAL2O94851 1124 aa20.23■□□□□ 0.83
RNF38-202ENST00000350199 GJB6O95452 261 aa20.23■□□□□ 0.83
RNF38-202ENST00000350199 KIAA0319LQ8IZA0 1049 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms