RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 MTMR3Q13615 1198 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 VEPH1Q14D04 833 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 CCDC40Q4G0X9 1142 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 TRIM59Q8IWR1 403 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 SHKBP1Q8TBC3 707 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 SRRTQ9BXP5 876 aaKnown RBP23.57■■□□□ 1.36
SNX3-202ENST00000349379 CYP3A43Q9HB55 503 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 IL21Q9HBE4 155 aa23.57■■□□□ 1.36
SNX3-202ENST00000349379 MAGEC2Q9UBF1 373 aaPredicted RBP23.57■■□□□ 1.36
SNX3-202ENST00000349379 TRIOO75962 3097 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 GPR37L1O60883 481 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 CLSTN1O94985 981 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 MYL4P12829 197 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 HMGA1P17096 107 aaKnown RBP23.56■■□□□ 1.36
SNX3-202ENST00000349379 NLRP12P59046 1061 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 RPL10AP62906 217 aaKnown RBP23.56■■□□□ 1.36
SNX3-202ENST00000349379 TDGQ13569 410 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 DPCR1Q3MIW9 517 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 MDH1BQ5I0G3 518 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 VSTM1Q6UX27 236 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 GAREM2Q75VX8 874 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 UNC93AQ86WB7 457 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 UBALD2Q8IYN6 164 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 CCDC150Q8NCX0 1101 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 RSAD2Q8WXG1 361 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 FGF14Q92915 247 aa23.56■■□□□ 1.36
SNX3-202ENST00000349379 MBD3O95983 291 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 FMO5P49326 533 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 CRYBG2Q8N1P7 616 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 FAM200AQ8TCP9 573 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 GIPC2Q8TF65 315 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 MCRS1Q96EZ8 462 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 CEP295NLQ96MC4 621 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 SMOC2Q9H3U7 446 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.55■■□□□ 1.366e-6■■■■■ 48.1
SNX3-202ENST00000349379 HMGXB4Q9UGU5 601 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 NUMBLQ9Y6R0 609 aa23.55■■□□□ 1.36
SNX3-202ENST00000349379 KIF26AQ9ULI4 1882 aaPredicted RBP23.54■■□□□ 1.36
SNX3-202ENST00000349379 NOL4O94818 638 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 FGFR1OPO95684 399 aaKnown RBP23.54■■□□□ 1.36
SNX3-202ENST00000349379 FGF19O95750 216 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 CSH1P0DML2 217 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 CSH2P0DML3 217 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 GJA1P17302 382 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 BDNFP23560 247 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 NDST1P52848 882 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 CYP27A1Q02318 531 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 SIGLEC14Q08ET2 396 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 DDR2Q16832 855 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 PARM1Q6UWI2 310 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 TRIM67Q6ZTA4 783 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 MTSS1LQ765P7 747 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 SLC44A3Q8N4M1 653 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 GPR152Q8TDT2 470 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 TNIP3Q96KP6 325 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 DUSP12Q9UNI6 340 aa23.54■■□□□ 1.36
SNX3-202ENST00000349379 A0A1W2PRU2 124 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 GABRR2P28476 465 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 TEAD2Q15562 447 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 SDHAF4Q5VUM1 108 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 ASIC4Q96FT7 647 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 TRMT2BQ96GJ1 504 aaKnown RBP23.53■■□□□ 1.36
SNX3-202ENST00000349379 SPATA17Q96L03 361 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 MYRFLQ96LU7 910 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 TWNKQ96RR1 684 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 RPP25Q9BUL9 199 aaKnown RBP23.53■■□□□ 1.36
SNX3-202ENST00000349379 B3GNT5Q9BYG0 378 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 GPR88Q9GZN0 384 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 ELOVL4Q9GZR5 314 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 FAM124BQ9H5Z6 455 aaPredicted RBP23.53■■□□□ 1.36
SNX3-202ENST00000349379 TMEM30AQ9NV96 361 aa23.53■■□□□ 1.36
SNX3-202ENST00000349379 P4HA2O15460 535 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 CILPO75339 1184 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 CCDC192P0DO97 292 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 FCARP24071 287 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 ERCC5P28715 1186 aaPredicted RBP23.52■■□□□ 1.36
SNX3-202ENST00000349379 CT47A1Q5JQC4 288 aaPredicted RBP23.52■■□□□ 1.36
SNX3-202ENST00000349379 PAQR9Q6ZVX9 377 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 TMEM150AQ86TG1 271 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 ACOT1Q86TX2 421 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 IRF2BP1Q8IU81 584 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 SCN4BQ8IWT1 228 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 STKLD1Q8NE28 680 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 WHAMMQ8TF30 809 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 TATDN2Q93075 761 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 ZSWIM3Q96MP5 696 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 ASB16Q96NS5 453 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 ZNF518BQ9C0D4 1074 aa23.52■■□□□ 1.36
SNX3-202ENST00000349379 HELZP42694 1942 aaKnown RBP23.52■■□□□ 1.36
SNX3-202ENST00000349379 COL4A2P08572 1712 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 FAM86C2PA6NEL3 165 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 SLC38A8A6NNN8 435 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 ECI2O75521 394 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 F11P03951 625 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 CDC25CP30307 473 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 CACNA2D1P54289 1103 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 KCNH2Q12809 1159 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 WDR44Q5JSH3 913 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 TMEM31Q5JXX7 168 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 FUKQ8N0W3 1084 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms