RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ZACNQ401N2 412 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 SCARA5Q6ZMJ2 495 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 SV2AQ7L0J3 742 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 GOLGA5Q8TBA6 731 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 ENOX1Q8TC92 643 aaKnown RBP17.2■□□□□ 0.34
RAB5C-201ENST00000346213 ZNF512Q96ME7 567 aaPredicted RBP17.2■□□□□ 0.34
RAB5C-201ENST00000346213 SYT15Q9BQS2 421 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 HSD3B7Q9H2F3 369 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 ASAH2Q9NR71 780 aa17.2■□□□□ 0.34
RAB5C-201ENST00000346213 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
RAB5C-201ENST00000346213 PRAMEF12O95522 483 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 SRFP11831 508 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 PLD1Q13393 1074 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 ORC1Q13415 861 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 GRM2Q14416 872 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 WDR72Q3MJ13 1102 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 ZC3H3Q8IXZ2 948 aaKnown RBP17.19■□□□□ 0.34
RAB5C-201ENST00000346213 THEM5Q8N1Q8 247 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 TMEM86AQ8N2M4 240 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 MYLPFQ96A32 169 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 RMND1Q9NWS8 449 aa17.19■□□□□ 0.34
RAB5C-201ENST00000346213 STAU1O95793 577 aaKnown RBP17.18■□□□□ 0.34
RAB5C-201ENST00000346213 MSNP26038 577 aaKnown RBP17.18■□□□□ 0.34
RAB5C-201ENST00000346213 AVPR2P30518 371 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 MCCD1P59942 119 aaPredicted RBP17.18■□□□□ 0.34
RAB5C-201ENST00000346213 TCF15Q12870 199 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 NCOA4Q13772 614 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 ZNF658Q5TYW1 1059 aaPredicted RBP17.18■□□□□ 0.34
RAB5C-201ENST00000346213 ANKRD40Q6AI12 368 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 VITQ6UXI7 678 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 ADSSL1Q8N142 457 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 SPC24Q8NBT2 197 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 TMC2Q8TDI7 906 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 TAS1R2Q8TE23 839 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 MMS19Q96T76 1030 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 PHOX2BQ99453 314 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 SMG9Q9H0W8 520 aaKnown RBP17.18■□□□□ 0.34
RAB5C-201ENST00000346213 GDE1Q9NZC3 331 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 HSFX1Q9UBD0 423 aa17.18■□□□□ 0.34
RAB5C-201ENST00000346213 NXF1Q9UBU9 619 aaKnown RBP17.18■□□□□ 0.34
RAB5C-201ENST00000346213 CALUO43852 315 aaPredicted RBP17.17■□□□□ 0.34
RAB5C-201ENST00000346213 GABRR2P28476 465 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 ALDH1A3P47895 512 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 GCLMP48507 274 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 EPHB3P54753 998 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 MYO1EQ12965 1108 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 DRC7Q8IY82 874 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
RAB5C-201ENST00000346213 SPPL2BQ8TCT7 592 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 SEMA4DQ92854 862 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 PCED1BQ96HM7 432 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 VRTNQ9H8Y1 702 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 SLC2A4RGQ9NR83 387 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 PCDHB5Q9Y5E4 795 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.17■□□□□ 0.342e-7■■■□□ 19.2
RAB5C-201ENST00000346213 ZFP37Q9Y6Q3 630 aaPredicted RBP17.17■□□□□ 0.34
RAB5C-201ENST00000346213 USP34Q70CQ2 3546 aa17.17■□□□□ 0.34
RAB5C-201ENST00000346213 CLDN5O00501 218 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 TACC1O75410 805 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 MICAL2O94851 1124 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 HLA-DRAP01903 254 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 GLULP15104 373 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 ASPAP45381 313 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 VAMP7P51809 220 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 USP46P62068 366 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 BIRC3Q13489 604 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 COBLL1Q53SF7 1204 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 IQCEQ6IPM2 695 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 PAQR9Q6ZVX9 377 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 DPH6Q7L8W6 267 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 FAM186BQ8IYM0 893 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 DCP1BQ8IZD4 617 aaKnown RBP17.16■□□□□ 0.34
RAB5C-201ENST00000346213 MED15Q96RN5 788 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 TWNKQ96RR1 684 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 MTF2Q9Y483 593 aaPredicted RBP17.16■□□□□ 0.34
RAB5C-201ENST00000346213 PPP1R3GB7ZBB8 358 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 ECI2O75521 394 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 F11P03951 625 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 FANCCQ00597 558 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 MYL7Q01449 175 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 TSPY1Q01534 308 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 ZNF699Q32M78 642 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 MDH1BQ5I0G3 518 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 CYP4A22Q5TCH4 519 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 FLCNQ8NFG4 579 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 NXPE3Q969Y0 559 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 DUSP9Q99956 384 aaKnown RBP17.16■□□□□ 0.34
RAB5C-201ENST00000346213 FOXQ1Q9C009 403 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 ZNF518BQ9C0D4 1074 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 MMRN2Q9H8L6 949 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 PTPRDP23468 1912 aa17.16■□□□□ 0.34
RAB5C-201ENST00000346213 OBSL1O75147 1896 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 ARNTLO00327 626 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 ASS1P00966 412 aaKnown RBP17.15■□□□□ 0.34
RAB5C-201ENST00000346213 CD72P21854 359 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 BDNFP23560 247 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 CLCN1P35523 988 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 LHX1P48742 406 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 ADAM9Q13443 819 aa17.15■□□□□ 0.34
RAB5C-201ENST00000346213 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms