RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 METP08581 1390 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 PSTPIP1O43586 416 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 NR1D2Q14995 579 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
COL12A1-202ENST00000345356 MRPS26Q9BYN8 205 aaKnown RBP12.58□□□□□ -0.4
COL12A1-202ENST00000345356 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 DCDC2Q9UHG0 476 aa12.58□□□□□ -0.4
COL12A1-202ENST00000345356 UBA6A0AVT1 1052 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 FKBP9O95302 570 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 AMPD2Q01433 879 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 LACTB2Q53H82 288 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 EFHC2Q5JST6 749 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 ACAD10Q6JQN1 1059 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 FKBP9P1Q75LS8 142 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 FEZF2Q8TBJ5 459 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 LRRC39Q96DD0 335 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CEP44Q9C0F1 390 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 EPS8L2Q9H6S3 715 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 HMG20AQ9NP66 347 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CLOCKO15516 846 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 C21orf2O43822 256 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 SP100P23497 879 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 ZFP1Q6P2D0 407 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 ST13P5Q8NFI4 369 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 REXO4Q9GZR2 422 aaKnown RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 SLC39A10Q9ULF5 831 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 RNF103O00237 685 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 PEX1O43933 1283 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CRKLP46109 303 aaKnown RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 NR1H2P55055 460 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 RPL10AP62906 217 aaKnown RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CBX3Q13185 183 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 KRT72Q14CN4 511 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 FUT11Q495W5 492 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 FAXCQ5TGI0 409 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 SEL1L3Q68CR1 1132 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 SLC26A11Q86WA9 606 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 PTPRN2Q92932 1015 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 FRMD8Q9BZ67 464 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 EPB41L4AQ9HCS5 686 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 TUFT1Q9NNX1 390 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 DKK3Q9UBP4 350 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 ZNF180Q9UJW8 692 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 AGO2Q9UKV8 859 aaKnown RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 AFF2P51816 1311 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 RALBP11234 206 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 AUHQ13825 339 aaKnown RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 SNRNP35Q16560 246 aaKnown RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 TBCELQ5QJ74 424 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 ARMC4Q5T2S8 1044 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CENPPQ6IPU0 288 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 TAS2R42Q7RTR8 314 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 LARGE2Q8N3Y3 721 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 IFT43Q96FT9 208 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 DEPDC7Q96QD5 511 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 EGFL8Q99944 293 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 C1orf50Q9BV19 199 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-202ENST00000345356 RSAD1Q9HA92 442 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CASS4Q9NQ75 786 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 PROCP04070 461 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 PDGFRAP16234 1089 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CDH3P22223 829 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 ADRA1DP25100 572 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 ALDH1A3P47895 512 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 SZRD1Q7Z422 152 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 RNF148Q8N7C7 305 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 TSPAN14Q8NG11 270 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 MCRS1Q96EZ8 462 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 AS3MTQ9HBK9 375 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 SALL3Q9BXA9 1300 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 CRB1P82279 1406 aa12.57□□□□□ -0.4
COL12A1-202ENST00000345356 E5RI56 91 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 P4HA2O15460 535 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL12A1-202ENST00000345356 NME3Q13232 169 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 SUSD4Q5VX71 490 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 SGPL1O95470 568 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 DHDDSQ86SQ9 333 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 TRIM69Q86WT6 500 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 SGF29Q96ES7 293 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 ZNF556Q9HAH1 456 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
COL12A1-202ENST00000345356 PI4KBQ9UBF8 816 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 PXDNLA1KZ92 1463 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 DNM1LO00429 736 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 TSPAN9O75954 239 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 IL12RB1P42701 662 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 HLFQ16534 295 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 TAF2Q6P1X5 1199 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 PPHLN1Q8NEY8 458 aaKnown RBP12.56□□□□□ -0.4
COL12A1-202ENST00000345356 DGCR14Q96DF8 476 aaKnown RBP12.56□□□□□ -0.4
COL12A1-202ENST00000345356 MAGED4Q96JG8 741 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 PLEKHG4BQ96PX9 1271 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 STAP1Q9ULZ2 295 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 GJA3Q9Y6H8 435 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 AK5Q9Y6K8 562 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms