RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 RRM1P23921 792 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 ADORA2BP29275 332 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 ALDH7A1P49419 539 aaKnown RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 YWHAHQ04917 246 aaPredicted RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 CCDC142Q17RM4 750 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 PTPN20Q4JDL3 420 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 MDH1BQ5I0G3 518 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 COL13A1Q5TAT6 717 aaPredicted RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 LIN9Q5TKA1 542 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 FUT10Q6P4F1 479 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 PAQR9Q6ZVX9 377 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 TMEM173Q86WV6 379 aaPredicted RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 FUKQ8N0W3 1084 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 ANKRD52Q8NB46 1076 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 TPCN2Q8NHX9 752 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 KIF18AQ8NI77 898 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 BCL7CQ8WUZ0 217 aaPredicted RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 ALS2CR12Q96Q35 445 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 CTTNBP2NLQ9P2B4 639 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 CHORDC1Q9UHD1 332 aaPredicted RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 SF3B1O75533 1304 aaKnown RBP eCLIP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 FGFR3P22607 806 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 CASQ1P31415 396 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 ELAVL2Q12926 359 aaKnown RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 PDCLQ13371 301 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 BTG3Q14201 252 aaPredicted RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 INTS6LQ5JSJ4 861 aaKnown RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 FAM171A1Q5VUB5 890 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 FAM171BQ6P995 826 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 OR10T2Q8NGX3 314 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 MYCBPAPQ8TBZ2 947 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 SLC35F5Q8WV83 523 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 CALR3Q96L12 384 aaKnown RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 CPXM1Q96SM3 734 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 CXXC1Q9P0U4 656 aaPredicted RBP17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 UVRAGQ9P2Y5 699 aa17.29■□□□□ 0.36
CEACAM1-202ENST00000344391 GRID2IPA4D2P6 1211 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 PALMO75781 387 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 GJB5O95377 273 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 EFEMP2O95967 443 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 GABRB2P47870 512 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 BCAT1P54687 386 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 HTRA4P83105 476 aaPredicted RBP17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 PLCB3Q01970 1234 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 PDE4CQ08493 712 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 BST2Q10589 180 aaKnown RBP17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 MRPL58Q14197 206 aaKnown RBP17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 PLEKHA7Q6IQ23 1121 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 LLGL2Q6P1M3 1020 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 KCNT2Q6UVM3 1135 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 STK32AQ8WU08 396 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 HERVK_113Q902F9 699 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 PKMYT1Q99640 499 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 NUP85Q9BW27 656 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 B3GNT5Q9BYG0 378 aa17.28■□□□□ 0.36
CEACAM1-202ENST00000344391 KIAA1671Q9BY89 1806 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 NLRC5Q86WI3 1866 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 TULP2O00295 520 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 VARS2Q5ST30 1063 aaKnown RBP17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 SPOUT1Q5T280 376 aaKnown RBP17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 PMF1Q6P1K2 205 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 PHLDB2Q86SQ0 1253 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 LRRC57Q8N9N7 239 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 MSANTD4Q8NCY6 345 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 ZNF564Q8TBZ8 553 aaPredicted RBP17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 DPF3Q92784 378 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 C18orf8Q96DM3 657 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 PCED1BQ96HM7 432 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 IGSF21Q96ID5 467 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 YME1L1Q96TA2 773 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 DUSP16Q9BY84 665 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 TJP2Q9UDY2 1190 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 STRIP2Q9ULQ0 834 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 MRPL42Q9Y6G3 142 aaKnown RBP17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 PTPRDP23468 1912 aa17.27■□□□□ 0.36
CEACAM1-202ENST00000344391 TCRBV5S1A1TA0A578 114 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 CLDN5O00501 218 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 CAPN15O75808 1086 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 GSCP56915 257 aaPredicted RBP17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 TSPY1Q01534 308 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 MAMLD1Q13495 774 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 SLFN11Q7Z7L1 901 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 LRRTM3Q86VH5 581 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 ZNF558Q96NG5 402 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 TMEM209Q96SK2 561 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 NAPGQ99747 312 aaPredicted RBP17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 SLC4A5Q9BY07 1137 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 MRPL47Q9HD33 250 aaKnown RBP17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 PARVAQ9NVD7 372 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 SCINQ9Y6U3 715 aa17.26■□□□□ 0.35
CEACAM1-202ENST00000344391 CTAGE9A4FU28 777 aa17.25■□□□□ 0.35
CEACAM1-202ENST00000344391 CARNS1A5YM72 827 aa17.25■□□□□ 0.35
CEACAM1-202ENST00000344391 BUB1BO60566 1050 aaPredicted RBP17.25■□□□□ 0.35
CEACAM1-202ENST00000344391 ERBB2P04626 1255 aa17.25■□□□□ 0.35
CEACAM1-202ENST00000344391 LAG3P18627 525 aa17.25■□□□□ 0.35
CEACAM1-202ENST00000344391 RPL34P49207 117 aaKnown RBP17.25■□□□□ 0.35
CEACAM1-202ENST00000344391 ZNF268Q14587 947 aaPredicted RBP17.25■□□□□ 0.35
CEACAM1-202ENST00000344391 MAPRE1Q15691 268 aaKnown RBP17.25■□□□□ 0.35
CEACAM1-202ENST00000344391 CYP4A22Q5TCH4 519 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms