RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 CUL2Q13617 745 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 PGM5Q15124 567 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 EFHC1Q5JVL4 640 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 HABP4Q5JVS0 413 aaKnown RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 TRIM54Q9BYV2 358 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ABI2Q9NYB9 513 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 USP15Q9Y4E8 981 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ANP32DO95626 131 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 APRTP07741 180 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 MYL4P12829 197 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 IFNA8P32881 189 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 PNPLA4P41247 253 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 MAGEA4P43358 317 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 EPHB3P54753 998 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 PDK1Q15118 436 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 TBCCQ15814 346 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 PPME1Q9Y570 386 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 TLR2O60603 784 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 XYLBO75191 536 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 CASP7P55210 303 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ZNF280AP59817 542 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 CTXN3Q4LDR2 81 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 TRIM65Q6PJ69 517 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ANO5Q75V66 913 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ATPAF2Q8N5M1 289 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ASIC4Q96FT7 647 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ZSWIM1Q9BR11 485 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 MMTAG2Q9BU76 263 aaKnown RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 TSSK1BQ9BXA7 367 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 RANBP17Q9H2T7 1088 aaKnown RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 DDX20Q9UHI6 824 aaKnown RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 IPPQ9Y573 584 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 PDGFRBP09619 1106 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 CCL5P13501 91 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 TAL1P17542 331 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ATXN3P54252 364 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 GIT2Q14161 759 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 CDR2LQ86X02 465 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-201ENST00000340748 SH2D3CQ8N5H7 860 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 ZIM3Q96PE6 472 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 NAGPAQ9UK23 515 aa13.41□□□□□ -0.26
DNMT1-201ENST00000340748 GAKO14976 1311 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 SYN1P17600 705 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 ITGA8P53708 1063 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 CDKAL1Q5VV42 579 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 TAS2R42Q7RTR8 314 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 EGFL8Q99944 293 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 SARS2Q9NP81 518 aaKnown RBP13.4□□□□□ -0.26
DNMT1-201ENST00000340748 RNF186Q9NXI6 227 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 ADA2Q9NZK5 511 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 CARSP49589 748 aaKnown RBP13.4□□□□□ -0.26
DNMT1-201ENST00000340748 POLE2P56282 527 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 ELAVL2Q12926 359 aaKnown RBP13.4□□□□□ -0.26
DNMT1-201ENST00000340748 GLRA4Q5JXX5 417 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 GJB7Q6PEY0 223 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 NOA1Q8NC60 698 aaKnown RBP13.4□□□□□ -0.26
DNMT1-201ENST00000340748 HASPINQ8TF76 798 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 SLITRK1Q96PX8 696 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 SLC7A5P2Q9GIP4 190 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.4□□□□□ -0.263e-6■■□□□ 14.4
DNMT1-201ENST00000340748 KLC4Q9NSK0 619 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
DNMT1-201ENST00000340748 LRP6O75581 1613 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 UBA6A0AVT1 1052 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-201ENST00000340748 HADHAP40939 763 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 MYBPC2Q14324 1141 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 GOLGA7BQ2TAP0 167 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 DLK2Q6UY11 383 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 SLC13A5Q86YT5 568 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-201ENST00000340748 PPIL6Q8IXY8 311 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 LTBP3Q9NS15 1303 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 GARTP22102 1010 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.263e-8■■□□□ 12.6
DNMT1-201ENST00000340748 PKN1Q16512 942 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 RBBP7Q16576 425 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 LLGL2Q6P1M3 1020 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 ANGPTL8Q6UXH0 198 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 CSGALNACT1Q8TDX6 532 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 RMDN1Q96DB5 314 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 MRGBPQ9NV56 204 aa13.4□□□□□ -0.26
DNMT1-201ENST00000340748 MTSS1O43312 755 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 E2F6O75461 281 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 NAMPTP43490 491 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 PPM1LQ5SGD2 360 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 TTC39BQ5VTQ0 682 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-201ENST00000340748 TDRD10Q5VZ19 366 aaKnown RBP13.39□□□□□ -0.27
DNMT1-201ENST00000340748 ICE2Q659A1 982 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.274e-6■■■■■ 27.3
DNMT1-201ENST00000340748 CATSPER1Q8NEC5 780 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 C9orf72Q96LT7 481 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 DBR1Q9UK59 544 aaKnown RBP13.39□□□□□ -0.27
DNMT1-201ENST00000340748 TLL2Q9Y6L7 1015 aa13.39□□□□□ -0.27
DNMT1-201ENST00000340748 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms