RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FOXR2Q6PJQ5 311 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 ELMOD1Q8N336 334 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 ST13P5Q8NFI4 369 aaPredicted RBP16.46■□□□□ 0.23
VAPA-201ENST00000340541 PJA1Q8NG27 643 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 TAS1R2Q8TE23 839 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 PSMG2Q969U7 264 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 TSG101Q99816 390 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 DUSP9Q99956 384 aaKnown RBP16.46■□□□□ 0.23
VAPA-201ENST00000340541 LPIN3Q9BQK8 851 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 SYT15Q9BQS2 421 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.23
VAPA-201ENST00000340541 SDCBP2Q9H190 292 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 SMYD3Q9H7B4 428 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 ABCB6Q9NP58 842 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 GDE1Q9NZC3 331 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 KIAA1468Q9P260 1216 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 NXF1Q9UBU9 619 aaKnown RBP16.46■□□□□ 0.23
VAPA-201ENST00000340541 CDH9Q9ULB4 789 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 SLC16A3O15427 465 aaKnown RBP16.45■□□□□ 0.22
VAPA-201ENST00000340541 LRRN2O75325 713 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 PDGFRBP09619 1106 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 EPB41P11171 864 aaKnown RBP16.45■□□□□ 0.22
VAPA-201ENST00000340541 PPP1R2P41236 205 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 CDH8P55286 799 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 PSMC1P62191 440 aaKnown RBP16.45■□□□□ 0.22
VAPA-201ENST00000340541 STIM1Q13586 685 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 ZNF667Q5HYK9 610 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 CYP4A22Q5TCH4 519 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 ZC3H14Q6PJT7 736 aaKnown RBP16.45■□□□□ 0.22
VAPA-201ENST00000340541 PDZD4Q76G19 769 aaPredicted RBP16.45■□□□□ 0.22
VAPA-201ENST00000340541 DNAJB7Q7Z6W7 309 aaPredicted RBP16.45■□□□□ 0.22
VAPA-201ENST00000340541 C1orf210Q8IVY1 113 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 TRIML1Q8N9V2 468 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 LEMD2Q8NC56 503 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 TAF4BQ92750 862 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 NELL2Q99435 816 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 PI4K2AQ9BTU6 479 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 RPP25Q9BUL9 199 aaKnown RBP16.45■□□□□ 0.22
VAPA-201ENST00000340541 TMEM8AQ9HCN3 771 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 ZNF334Q9HCZ1 680 aaPredicted RBP16.45■□□□□ 0.22
VAPA-201ENST00000340541 ASAH2Q9NR71 780 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 ASB3Q9Y575 518 aa16.45■□□□□ 0.22
VAPA-201ENST00000340541 KANSL1LA0AUZ9 987 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 ZNF197O14709 1029 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 LMNAP02545 664 aaKnown RBP16.44■□□□□ 0.22
VAPA-201ENST00000340541 DCNP07585 359 aaKnown RBP16.44■□□□□ 0.22
VAPA-201ENST00000340541 MYL4P12829 197 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 GJA1P17302 382 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 CYP2F1P24903 491 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 GTF2H1P32780 548 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 GNL1P36915 607 aaPredicted RBP16.44■□□□□ 0.22
VAPA-201ENST00000340541 MAGEA9P43362 315 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 RAP1GAPP47736 663 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 GPR15P49685 360 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 CFAP221Q4G0U5 840 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 SLC44A4Q53GD3 710 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 SPOPLQ6IQ16 392 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 KLHL10Q6JEL2 608 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 OR6B3Q8NGW1 331 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 SHKBP1Q8TBC3 707 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 NELFBQ8WX92 580 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 MCRS1Q96EZ8 462 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 SNX25Q9H3E2 840 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 DPEP3Q9H4B8 488 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 CLSTN2Q9H4D0 955 aa16.44■□□□□ 0.22
VAPA-201ENST00000340541 APOBEC3GQ9HC16 384 aaKnown RBP16.44■□□□□ 0.22
VAPA-201ENST00000340541 SPTBN4Q9H254 2564 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 ECI2O75521 394 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 HMGA1P17096 107 aaKnown RBP16.43■□□□□ 0.22
VAPA-201ENST00000340541 PIK3CAP42336 1068 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 ASPAP45381 313 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 C1QBPQ07021 282 aaKnown RBP16.43■□□□□ 0.22
VAPA-201ENST00000340541 KRT39Q6A163 491 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 SCARA5Q6ZMJ2 495 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 GAREM2Q75VX8 874 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 ERMP1Q7Z2K6 904 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 MYCBPAPQ8TBZ2 947 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 GIPC2Q8TF65 315 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 SEMA4DQ92854 862 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 MYLPFQ96A32 169 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 PCED1BQ96HM7 432 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 FUBP3Q96I24 572 aaKnown RBP eCLIP16.43■□□□□ 0.22
VAPA-201ENST00000340541 ZSWIM3Q96MP5 696 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 CEP63Q96MT8 703 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 MMRN2Q9H8L6 949 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 IL21Q9HBE4 155 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 CTNND2Q9UQB3 1225 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 DMDP11532 3685 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 GREB1Q4ZG55 1949 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 DENND4CQ5VZ89 1909 aa16.43■□□□□ 0.22
VAPA-201ENST00000340541 OBSL1O75147 1896 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 SP9P0CG40 484 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 PTPN1P18031 435 aaKnown RBP16.42■□□□□ 0.22
VAPA-201ENST00000340541 FCARP24071 287 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 MAGEA11P43364 429 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 MXI1P50539 228 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 VEPH1Q14D04 833 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 TEAD2Q15562 447 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 MLF2Q15773 248 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms