RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 SUPT20HL2P0C7V6 817 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 MYL2P10916 166 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 VCPP55072 806 aaKnown RBP11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 AP1B1Q10567 949 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 SUPT20HL1Q3ZLR7 823 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 ISLR2Q6UXK2 745 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 RSPH3Q86UC2 560 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 CDKL2Q92772 493 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 CENPTQ96BT3 561 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 ADAMTSL3P82987 1691 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 PDE4DIPQ5VU43 2346 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 AVILO75366 819 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 CST3P01034 146 aaPredicted RBP11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 MAPTP10636 758 aaKnown RBP11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 NME3Q13232 169 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 THOC5Q13769 683 aaKnown RBP11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 CHI3L2Q15782 390 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 CCDC14Q49A88 953 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 ZCCHC23Q6ZST2 131 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 BORCS6Q96GS4 357 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 SENP1Q9P0U3 644 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 DLGAP2Q9P1A6 1054 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 SCOCQ9UIL1 159 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 C15orf41Q9Y2V0 281 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 COMMD10Q9Y6G5 202 aa11.6□□□□□ -0.55
SEMA4D-201ENST00000339861 GOLGB1Q14789 3259 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 MROH7Q68CQ1 1323 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 COL4A1P02462 1669 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 SPECC1L-ADORA2AF8WAN1 911 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 RASSF9O75901 435 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 KRT38O76015 456 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 UBTFL6P0CB48 400 aaPredicted RBP11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 ARL4AP40617 200 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 MMRN1Q13201 1228 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 ATF7IP2Q5U623 682 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 RGS9BPQ6ZS82 235 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 AGGF1Q8N302 714 aaeCLIP11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 SLC26A7Q8TE54 656 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 GPRASP2Q96D09 838 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 A1CFQ9NQ94 594 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 TELO2Q9Y4R8 837 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 SERPINB3P29508 390 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 BACE1P56817 501 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 NOMO3P69849 1222 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 KDELC2Q7Z4H8 507 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 SEPT1Q8WYJ6 367 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 ZNF75CPQ92670 426 aaPredicted RBP11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 MYH11P35749 1972 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 USP54Q70EL1 1684 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 ITGB4P16144 1822 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 DENND1BQ6P3S1 775 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 EP400NLQ6ZTU2 488 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 ECHDC2Q86YB7 292 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 CPB2Q96IY4 423 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 CLMNQ96JQ2 1002 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 CGRRF1Q99675 332 aa11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 SPATS2LQ9NUQ6 558 aaKnown RBP11.59□□□□□ -0.55
SEMA4D-201ENST00000339861 OSBPP22059 807 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 GLRA2P23416 452 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 RXRBP28702 533 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 XRCC4Q13426 336 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 MTFR1Q15390 333 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 SLC1A5Q15758 541 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 ZACNQ401N2 412 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 ATG16L1Q676U5 607 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 EFCAB12Q6NXP0 572 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 TMEM154Q6P9G4 183 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 DNAJC9Q8WXX5 260 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 DNAI2Q9GZS0 605 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 FBXO6Q9NRD1 293 aaPredicted RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 GEMIN8Q9NWZ8 242 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 GGA3Q9NZ52 723 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 CPSF2Q9P2I0 782 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 KBTBD13C9JR72 458 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 LIASO43766 372 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 ATP9BO43861 1147 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 TXNP10599 105 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 FAAP100Q0VG06 881 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 C15orf59Q2T9L4 293 aaPredicted RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 ANKRD20A2Q5SQ80 823 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 SWT1Q5T5J6 900 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 ANKRD20A1Q5TYW2 823 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 HEATR6Q6AI08 1181 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 VSIG10LQ86VR7 867 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 TTC8Q8TAM2 541 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 ZNF317Q96PQ6 595 aaPredicted RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 SLITRK1Q96PX8 696 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 C17orf75Q9HAS0 396 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 ADGRA3Q8IWK6 1321 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 NEMP1O14524 444 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 CCDC22O60826 627 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 STAMBPO95630 424 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 SNRPFP62306 86 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 VSTM1Q6UX27 236 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 DEFB132Q7Z7B7 95 aa11.58□□□□□ -0.56
SEMA4D-201ENST00000339861 WDR75Q8IWA0 830 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms