RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 DLATP10515 647 aaKnown RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 KITP10721 976 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 CPA3P15088 417 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 ZNF12P17014 697 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 RPA1P27694 616 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 ALDH18A1P54886 795 aaKnown RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 NLRP6P59044 892 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 CDK16Q00536 496 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 OTUD4Q01804 1114 aaKnown RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 UBAP2LQ14157 1087 aaKnown RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 ARL6IP4Q66PJ3 421 aaKnown RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 TPTE2Q6XPS3 522 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 TAS2R42Q7RTR8 314 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 ITIH5Q86UX2 942 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 MIGA1Q8NAN2 632 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 SPATA5Q8NB90 893 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 PCYOX1LQ8NBM8 494 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 DENND1AQ8TEH3 1009 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 C1orf54Q8WWF1 131 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 ATG4AQ8WYN0 398 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 ARHGEF26Q96DR7 871 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 KCNK13Q9HB14 408 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 SCINQ9Y6U3 715 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 SOBPA7XYQ1 873 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 KRT10P13645 584 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 ATF3P18847 181 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 BMXP51813 675 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 ARHGAP4P98171 946 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 SELENBP1Q13228 472 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 PPP6R3Q5H9R7 873 aaPredicted RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 FGD3Q5JSP0 725 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 AGAP9Q5VTM2 703 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 DHRS4L2Q6PKH6 230 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 TRAF7Q6Q0C0 670 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 LMBR1LQ6UX01 489 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 TMC5Q6UXY8 1006 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 CATIPQ7Z7H3 387 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 NOP9Q86U38 636 aaKnown RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 MARVELD2Q8N4S9 558 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 TBC1D15Q8TC07 691 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 RPGRQ92834 1020 aaKnown RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 OXNAD1Q96HP4 312 aaPredicted RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 FAM20AQ96MK3 541 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 PHF20Q9BVI0 1012 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 NAA50Q9GZZ1 169 aaKnown RBP10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 CAAP1Q9H8G2 361 aa10.09□□□□□ -0.79
PTCHD4-201ENST00000339488 NEURL1BA8MQ27 555 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 MAGEC1O60732 1142 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 CDH16O75309 829 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 SULT1C4O75897 302 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 FAM58BPP0C7Q3 252 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 SLC9A1P19634 815 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 CXCR2P25025 360 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 ALDH1A3P47895 512 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 GALCP54803 685 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 EN1Q05925 392 aaPredicted RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 MTM1Q13496 603 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 DNASE1L3Q13609 305 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 GCKRQ14397 625 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 EFHC1Q5JVL4 640 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 TRMT10CQ7L0Y3 403 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 MMAAQ8IVH4 418 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 SLC35G2Q8TBE7 412 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 MXD3Q9BW11 206 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 TRIM55Q9BYV6 548 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 TRIM9Q9C026 710 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 FANCEQ9HB96 536 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 PIH1D3Q9NQM4 214 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 NDFIP2Q9NV92 336 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 SEPT11Q9NVA2 429 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 COQ3Q9NZJ6 369 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 SLC17A7Q9P2U7 560 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 PCDHB2Q9Y5E7 798 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 DISP2A7MBM2 1401 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 MRC1P22897 1456 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 CACNA1FO60840 1977 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 GOLGA8CPA6NN73 597 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 KMOO15229 486 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 CLOCKO15516 846 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 H2AFZP0C0S5 128 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 PDE6AP16499 860 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 JAK1P23458 1154 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 MSX2P35548 267 aaPredicted RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 ITGA8P53708 1063 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 NUP107P57740 925 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 NPY5RQ15761 445 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF568Q3ZCX4 644 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 H2AFVQ71UI9 128 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 PRPF39Q86UA1 669 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 TRABD2AQ86V40 505 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 SGMS1Q86VZ5 419 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 RHOT2Q8IXI1 618 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 CPSF7Q8N684 471 aaKnown RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 TSPAN14Q8NG11 270 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 ISOC1Q96CN7 298 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 TMEM87BQ96K49 555 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 BIRC8Q96P09 236 aa10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
PTCHD4-201ENST00000339488 THEGQ9P2T0 379 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms