RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ECT2Q9H8V3 914 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 DUS2Q9NX74 493 aaKnown RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 STYXL1Q9Y6J8 313 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 PTPRDP23468 1912 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 NOL4O94818 638 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 IL18RAPO95256 599 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 USP17L7P0C7H9 530 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 PLCG1P19174 1290 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 IFNAR2P48551 515 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 NOVA1P51513 510 aaKnown RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 RPL10AP62906 217 aaKnown RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 PSMD2Q13200 908 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 ZC2HC1CQ53FD0 456 aaPredicted RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 DAB2IPQ5VWQ8 1189 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 RAD54LQ92698 747 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 MYRFLQ96LU7 910 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 CEP295Q9C0D2 2601 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 ST6GALNAC4Q9H4F1 302 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 TRPC7Q9HCX4 862 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 ABCB6Q9NP58 842 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 TNRC6BQ9UPQ9 1833 aaKnown RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 TRAV19A0A0A6YYK7 116 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 LNP1A1A4G5 178 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 C4orf47A7E2U8 309 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 CKMP06732 381 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 NEFLP07196 543 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 GBP1P32455 592 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 DGKEP52429 567 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 ZNF252P-AS1Q0IIN9 211 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 DDR2Q16832 855 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 EML3Q32P44 896 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 CRELD2Q6UXH1 353 aaPredicted RBP12.36□□□□□ -0.43
CSMD2-202ENST00000338325 UNQ6494/PRO21346Q6UXR6 183 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 C11orf74Q86VG3 221 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 PDCL2Q8N4E4 241 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 TTC16Q8NEE8 873 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 RASSF8Q8NHQ8 419 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 POMGNT1Q8WZA1 660 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 LARP4BQ92615 738 aaKnown RBP12.36□□□□□ -0.43
CSMD2-202ENST00000338325 KIF2CQ99661 725 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 ACBD6Q9BR61 282 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 WNT6Q9Y6F9 365 aa12.36□□□□□ -0.43
CSMD2-202ENST00000338325 ABCA7Q8IZY2 2146 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 H3BQV1 296 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 GIPC1O14908 333 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 HUS1O60921 280 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 CYP2F1P24903 491 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 POLR2BP30876 1174 aaKnown RBP12.35□□□□□ -0.43
CSMD2-202ENST00000338325 MYL7Q01449 175 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 NR1H3Q13133 447 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 POSTNQ15063 836 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 USP39Q53GS9 565 aaKnown RBP12.35□□□□□ -0.43
CSMD2-202ENST00000338325 INTS6LQ5JSJ4 861 aaKnown RBP12.35□□□□□ -0.43
CSMD2-202ENST00000338325 PMS2CLQ68D20 193 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 TSTD1Q8NFU3 115 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 CCDC26Q8TAB7 109 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 HVCN1Q96D96 273 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 SLC22A12Q96S37 553 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 CYP2S1Q96SQ9 504 aa12.35□□□□□ -0.43
CSMD2-202ENST00000338325 DDX43Q9NXZ2 648 aaKnown RBP12.35□□□□□ -0.43
CSMD2-202ENST00000338325 RALYQ9UKM9 306 aaKnown RBP12.35□□□□□ -0.43
CSMD2-202ENST00000338325 PLXND1Q9Y4D7 1925 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 C1QTNF9BB2RNN3 333 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 ITGB3P05106 788 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 C1QTNF9P0C862 333 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 TCF3P15923 654 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 ACAT1P24752 427 aaKnown RBP12.34□□□□□ -0.43
CSMD2-202ENST00000338325 ADSSP30520 456 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 FOXC1Q12948 553 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 SH3PXD2AQ5TCZ1 1133 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 SPATA2LQ8IUW3 424 aaPredicted RBP12.34□□□□□ -0.43
CSMD2-202ENST00000338325 TMEM86AQ8N2M4 240 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 KRI1Q8N9T8 703 aaKnown RBP12.34□□□□□ -0.43
CSMD2-202ENST00000338325 FSIP1Q8NA03 581 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 SPATA18Q8TC71 538 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 SH3RF2Q8TEC5 729 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 TPSD1Q9BZJ3 242 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 IKZF4Q9H2S9 585 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 TMEM9BQ9NQ34 198 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 GCNT4Q9P109 453 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 AGAP1Q9UPQ3 857 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 INVSQ9Y283 1065 aa12.34□□□□□ -0.43
CSMD2-202ENST00000338325 KHNYNO15037 678 aaKnown RBP12.33□□□□□ -0.44
CSMD2-202ENST00000338325 PPP1R37O75864 691 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 NFATC1O95644 943 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 LONP1P36776 959 aaKnown RBP12.33□□□□□ -0.44
CSMD2-202ENST00000338325 WNT7BP56706 349 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 TFAMQ00059 246 aaKnown RBP12.33□□□□□ -0.44
CSMD2-202ENST00000338325 KCNB1Q14721 858 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 CFAP221Q4G0U5 840 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 ZNF720Q7Z2F6 126 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 CYP2U1Q7Z449 544 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 OSTM1Q86WC4 334 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 RASSF3Q86WH2 238 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 SFR1Q86XK3 245 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 BRSK2Q8IWQ3 736 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 LRRC52Q8N7C0 313 aa12.33□□□□□ -0.44
CSMD2-202ENST00000338325 ARL14EPQ8N8R7 260 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms