RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SPTBN4Q9H254 2564 aa11.44□□□□□ -0.58
CAPN3-202ENST00000337571 NCANO14594 1321 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 CUTAO60888 179 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 PRAMEF12O95522 483 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 F11P03951 625 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 TNNI1P19237 187 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 ACAT1P24752 427 aaKnown RBP11.43□□□□□ -0.58
CAPN3-202ENST00000337571 CYP2F1P24903 491 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 CNR2P34972 360 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 SATB1Q01826 763 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 TNK2Q07912 1038 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 PON2Q15165 354 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 MAPRE1Q15691 268 aaKnown RBP11.43□□□□□ -0.58
CAPN3-202ENST00000337571 DDR2Q16832 855 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 TXNDC8Q6A555 127 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 C4orf50Q6ZRC1 276 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 PRR23BQ6ZRT6 265 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 MON1AQ86VX9 555 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 ADGRF2Q8IZF7 708 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 LEO1Q8WVC0 666 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-202ENST00000337571 RMDN1Q96DB5 314 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 FNBP1Q96RU3 617 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 MMS19Q96T76 1030 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 MTMR12Q9C0I1 747 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 KIF9Q9HAQ2 790 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 TMLHEQ9NVH6 421 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 INTS13Q9NVM9 706 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 KBTBD4Q9NVX7 518 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 FAM13BQ9NYF5 915 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 MAGEC2Q9UBF1 373 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-202ENST00000337571 COL4A2P08572 1712 aa11.43□□□□□ -0.58
CAPN3-202ENST00000337571 KIF26AQ9ULI4 1882 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 EIF3DO15371 548 aaKnown RBP eCLIP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 ATG13O75143 517 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 YEATS4O95619 227 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 HMGA1P17096 107 aaKnown RBP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 ME1P48163 572 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 GPR15P49685 360 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 WNT7BP56706 349 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 SNRPFP62306 86 aaKnown RBP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 GRSF1Q12849 480 aaKnown RBP eCLIP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 RUNX3Q13761 415 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 SIM2Q14190 667 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 FOXD4L5Q5VV16 416 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 HS2ST1Q7LGA3 356 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 WDR49Q8IV35 697 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 ZNF507Q8TCN5 953 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 FOXD4L4Q8WXT5 416 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 USP13Q92995 863 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 HPS3Q969F9 1004 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 FUBP3Q96I24 572 aaKnown RBP eCLIP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 FGFBP2Q9BYJ0 223 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 TRPC7Q9HCX4 862 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 RBM12Q9NTZ6 932 aaKnown RBP11.42□□□□□ -0.58
CAPN3-202ENST00000337571 HSPBP1Q9NZL4 362 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 EHD2Q9NZN4 543 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 CDH9Q9ULB4 789 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 USP18Q9UMW8 372 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 DENND4CQ5VZ89 1909 aa11.42□□□□□ -0.58
CAPN3-202ENST00000337571 TRAV19A0A0A6YYK7 116 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 PRR5-ARHGAP8B1AHC4 643 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 CHURC1-FNTBB4DL54 471 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 GABRDO14764 452 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 POLR2DO15514 142 aaKnown RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 NOL4O94818 638 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 CKMP06732 381 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 PDGFRBP09619 1106 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 USP17L7P0C7H9 530 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 DLATP10515 647 aaKnown RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 ANXA13P27216 316 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 GRIK1P39086 918 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 FNTBP49356 437 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 PDE6CP51160 858 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 ARHGAP8P85298 464 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 CYP27A1Q02318 531 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 LMNB2Q03252 620 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 ZNF268Q14587 947 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 PDGFRLQ15198 375 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 E2F4Q16254 413 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 SNRNP35Q16560 246 aaKnown RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 LPAL2Q16609 132 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 FOXD4L6Q3SYB3 417 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 CFAP221Q4G0U5 840 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 FAM26FQ5R3K3 315 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 SDHAF4Q5VUM1 108 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 LMBRD2Q68DH5 695 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 HEATR6Q6AI08 1181 aaKnown RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 LAIR1Q6GTX8 287 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 TXNDC11Q6PKC3 985 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 FOXD4L3Q6VB84 417 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-202ENST00000337571 CEP68Q76N32 757 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 TMEM150AQ86TG1 271 aa11.41□□□□□ -0.58
CAPN3-202ENST00000337571 LONP2Q86WA8 852 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms