RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SNHG28P0DPA3 235 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 CYP24A1Q07973 514 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 LAMTOR4Q0VGL1 99 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 HSDL1Q3SXM5 330 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 WLSQ5T9L3 541 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 CEP128Q6ZU80 1094 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 ERO1BQ86YB8 467 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 RNF139Q8WU17 664 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 DDX50Q9BQ39 737 aaKnown RBP6.79□□□□□ -1.32
HMG20A-201ENST00000336216 VPS11Q9H270 941 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 TRABDQ9H4I3 376 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 TUT1Q9H6E5 874 aaKnown RBP6.79□□□□□ -1.32
HMG20A-201ENST00000336216 SMYD3Q9H7B4 428 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 AJAP1Q9UKB5 411 aaPredicted RBP6.79□□□□□ -1.32
HMG20A-201ENST00000336216 NEU2Q9Y3R4 380 aa6.79□□□□□ -1.32
HMG20A-201ENST00000336216 KAT6AQ92794 2004 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PABPN1LA6NDY0 278 aaKnown RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 H0YGN5 161 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 NVLO15381 856 aaKnown RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 LCA5LO95447 670 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 CCNE2O96020 404 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 GSTA1P08263 222 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 GSTA2P09210 222 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 RARGP13631 454 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 KCNA3P22001 575 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 EPHX2P34913 555 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 TNFSF9P41273 254 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ADCYAP1R1P41586 468 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ARL4CP56559 192 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 RCN1Q15293 331 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 TREML2Q5T2D2 321 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 IER5Q5VY09 327 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ACAD10Q6JQN1 1059 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ENOSF1Q7L5Y1 443 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 RNF135Q8IUD6 432 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PRELID2Q8N945 189 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 TTC8Q8TAM2 541 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ZNF606Q8WXB4 792 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 FGD4Q96M96 766 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ZSWIM1Q9BR11 485 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 MYLK2Q9H1R3 596 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 RANBP17Q9H2T7 1088 aaKnown RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PDGFCQ9NRA1 345 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 WRAP73Q9P2S5 460 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 UVRAGQ9P2Y5 699 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 STOML1Q9UBI4 398 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PHTF1Q9UMS5 762 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PRG3Q9Y2Y8 225 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 AFG3L2Q9Y4W6 797 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 NFS1Q9Y697 457 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 LAMB2P55268 1798 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 LY75O60449 1722 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PFASO15067 1338 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 OGTO15294 1046 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PPFIA2O75334 1257 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 RARAP10276 462 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ACAT1P24752 427 aaKnown RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 CHKAP35790 457 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 TGFB2P61812 414 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 TMPRSS15P98073 1019 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 KDSRQ06136 332 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 NBPF20Q3BBV1 942 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 CHST13Q8NET6 341 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 OR5B17Q8NGF7 314 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 FEZF2Q8TBJ5 459 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 RNF217Q8TC41 542 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PPP4R1Q8TF05 950 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 SKA2Q8WVK7 121 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ABTB1Q969K4 478 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 CCDC124Q96CT7 223 aaKnown RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 SNF8Q96H20 258 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 CYP39A1Q9NYL5 469 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 GGA2Q9UJY4 613 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 GTF3C4Q9UKN8 822 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 NAALADL1Q9UQQ1 740 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 B4GALT5O43286 388 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 MAP3K7O43318 606 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 DCTN3O75935 186 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 KRT7P08729 469 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 ZSCAN5DPP0CG00 497 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 NCF2P19878 526 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 UBA1P22314 1058 aaKnown RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 MMP13P45452 471 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 FOXD4Q12950 439 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 SLC12A1Q13621 1099 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 TSTA3Q13630 321 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 HIF1AQ16665 826 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 LRRC23Q53EV4 343 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 DUPD1Q68J44 220 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 C3orf62Q6ZUJ4 267 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 MTDHQ86UE4 582 aaKnown RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 METTL23Q86XA0 190 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 CCDC117Q8IWD4 279 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 CDKL2Q92772 493 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PGM2Q96G03 612 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 L3MBTL3Q96JM7 780 aaPredicted RBP6.78□□□□□ -1.32
HMG20A-201ENST00000336216 CHST7Q9NS84 486 aa6.78□□□□□ -1.32
HMG20A-201ENST00000336216 PPARGC1AQ9UBK2 798 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms