RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 LRRC52Q8N7C0 313 aa26.19■■□□□ 1.78
CDKN3-202ENST00000335183 CHFRQ96EP1 664 aa26.19■■□□□ 1.78
CDKN3-202ENST00000335183 CBWD1Q9BRT8 395 aa26.19■■□□□ 1.78
CDKN3-202ENST00000335183 FGFBP2Q9BYJ0 223 aa26.19■■□□□ 1.78
CDKN3-202ENST00000335183 OLFML3Q9NRN5 406 aa26.19■■□□□ 1.78
CDKN3-202ENST00000335183 UXTQ9UBK9 157 aaPredicted RBP26.19■■□□□ 1.78
CDKN3-202ENST00000335183 ITGA11Q9UKX5 1188 aa26.19■■□□□ 1.78
CDKN3-202ENST00000335183 HELZP42694 1942 aaKnown RBP26.18■■□□□ 1.78
CDKN3-202ENST00000335183 SOBPA7XYQ1 873 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 TRDMT1O14717 391 aaKnown RBP26.18■■□□□ 1.78
CDKN3-202ENST00000335183 AXIN1O15169 862 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 ATG13O75143 517 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 EGFP01133 1207 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 TMEM191BP0C7N4 346 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 AMPD2Q01433 879 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 CCDC142Q17RM4 750 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 ADGRF2Q8IZF7 708 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 MTMR12Q9C0I1 747 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 PDE11AQ9HCR9 933 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 ABCB6Q9NP58 842 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 PANK4Q9NVE7 773 aa26.18■■□□□ 1.78
CDKN3-202ENST00000335183 HCRTO43612 131 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 RNF40O75150 1001 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 TADA3O75528 432 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 NOL4O94818 638 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 PRPF6O94906 941 aaKnown RBP26.17■■□□□ 1.78
CDKN3-202ENST00000335183 CCDC192P0DO97 292 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 RBP5P82980 135 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 RESTQ13127 1097 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 CUL4AQ13619 759 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 ALCAMQ13740 583 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 PPM1JQ5JR12 505 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 LMBRD2Q68DH5 695 aaPredicted RBP26.17■■□□□ 1.78
CDKN3-202ENST00000335183 SPATA2LQ8IUW3 424 aaPredicted RBP26.17■■□□□ 1.78
CDKN3-202ENST00000335183 SCN4BQ8IWT1 228 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 GAB3Q8WWW8 586 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 PKMYT1Q99640 499 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 GDAP2Q9NXN4 497 aa26.17■■□□□ 1.78
CDKN3-202ENST00000335183 R3HCC1Q9Y3T6 440 aaKnown RBP26.17■■□□□ 1.78
CDKN3-202ENST00000335183 KIAA1549LQ6ZVL6 1849 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 RPP40O75818 363 aaKnown RBP26.16■■□□□ 1.78
CDKN3-202ENST00000335183 KCNA4P22459 653 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 ZNF268Q14587 947 aaPredicted RBP26.16■■□□□ 1.78
CDKN3-202ENST00000335183 MTF1Q14872 753 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 PDGFRLQ15198 375 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 TOP6BLQ8N6T0 577 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 CXorf38Q8TB03 319 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 TRMT2BQ96GJ1 504 aaKnown RBP26.16■■□□□ 1.78
CDKN3-202ENST00000335183 P2RY13Q9BPV8 354 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 ARRDC1-AS1Q9H2J1 176 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 TMEM206Q9H813 350 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 FBRSL1Q9HCM7 1045 aaKnown RBP26.16■■□□□ 1.78
CDKN3-202ENST00000335183 SIX4Q9UIU6 781 aa26.16■■□□□ 1.78
CDKN3-202ENST00000335183 FOXD2O60548 495 aaPredicted RBP26.15■■□□□ 1.78
CDKN3-202ENST00000335183 CKMP06732 381 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 ADRB1P08588 477 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 GJA4P35212 333 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 LHX1P48742 406 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 GALK1P51570 392 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 FAM160A1Q05DH4 1040 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 CCDC6Q16204 474 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 AASDHQ4L235 1098 aaPredicted RBP26.15■■□□□ 1.78
CDKN3-202ENST00000335183 CACNA2D4Q7Z3S7 1137 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 GPD1LQ8N335 351 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 CPA6Q8N4T0 437 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 ANKRD36BP1Q96IX9 119 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 CYP2S1Q96SQ9 504 aa26.15■■□□□ 1.78
CDKN3-202ENST00000335183 POLR3BQ9NW08 1133 aaPredicted RBP26.15■■□□□ 1.78
CDKN3-202ENST00000335183 DUS2Q9NX74 493 aaKnown RBP26.15■■□□□ 1.78
CDKN3-202ENST00000335183 PTPRDP23468 1912 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 A0A087X0B3 334 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 TRAV19A0A0A6YYK7 116 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 FRMD3A2A2Y4 597 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 CENPBP07199 599 aaPredicted RBP26.14■■□□□ 1.78
CDKN3-202ENST00000335183 USP17L7P0C7H9 530 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 SYT1P21579 422 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 DRD1P21728 446 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 PCSK1P29120 753 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 IFNAR2P48551 515 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 SOWAHAQ2M3V2 549 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 NAIF1Q69YI7 327 aaPredicted RBP26.14■■□□□ 1.78
CDKN3-202ENST00000335183 KBTBD6Q86V97 674 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 PDILTQ8N807 584 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 SPATA18Q8TC71 538 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 EXOC4Q96A65 974 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 MYRFLQ96LU7 910 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 SLC22A12Q96S37 553 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 ECT2Q9H8V3 914 aa26.14■■□□□ 1.78
CDKN3-202ENST00000335183 CCDC163A0A0D9SF12 145 aa26.13■■□□□ 1.77
CDKN3-202ENST00000335183 GABRDO14764 452 aa26.13■■□□□ 1.77
CDKN3-202ENST00000335183 MYO1EQ12965 1108 aa26.13■■□□□ 1.77
CDKN3-202ENST00000335183 SF3A2Q15428 464 aaKnown RBP26.13■■□□□ 1.77
CDKN3-202ENST00000335183 ZNF77Q15935 545 aa26.13■■□□□ 1.77
CDKN3-202ENST00000335183 CFAP221Q4G0U5 840 aa26.13■■□□□ 1.77
CDKN3-202ENST00000335183 CCDC65Q8IXS2 484 aa26.13■■□□□ 1.77
CDKN3-202ENST00000335183 C12orf50Q8NA57 414 aaPredicted RBP26.13■■□□□ 1.77
CDKN3-202ENST00000335183 OSCP1Q8WVF1 389 aa26.13■■□□□ 1.77
CDKN3-202ENST00000335183 FUBP3Q96I24 572 aaKnown RBP eCLIP26.13■■□□□ 1.77
CDKN3-202ENST00000335183 HHIPQ96QV1 700 aa26.13■■□□□ 1.77
CDKN3-202ENST00000335183 USP28Q96RU2 1077 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms