RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 CCDC22O60826 627 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 NR3C2P08235 984 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 UNGP13051 313 aaPredicted RBP21.66■■□□□ 1.06
SPNS1-203ENST00000334536 KRT5P13647 590 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 ACADVLP49748 655 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 SESN3P58005 492 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 RPL26P61254 145 aaKnown RBP21.66■■□□□ 1.06
SPNS1-203ENST00000334536 ZNF568Q3ZCX4 644 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 SLC44A4Q53GD3 710 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 MCOLN2Q8IZK6 566 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 KCNN1Q92952 543 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 C1orf112Q9NSG2 853 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 RNF146Q9NTX7 359 aa21.66■■□□□ 1.06
SPNS1-203ENST00000334536 ZNF862O60290 1169 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 UBTFL6P0CB48 400 aaPredicted RBP21.65■■□□□ 1.06
SPNS1-203ENST00000334536 CLDN10P78369 228 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 DSG1Q02413 1049 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 BAATQ14032 418 aaPredicted RBP21.65■■□□□ 1.06
SPNS1-203ENST00000334536 TBC1D10BQ4KMP7 808 aaPredicted RBP21.65■■□□□ 1.06
SPNS1-203ENST00000334536 CIAPIN1Q6FI81 312 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 ACAD11Q709F0 780 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 KRT82Q9NSB4 513 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 TUBA8Q9NY65 449 aaPredicted RBP21.65■■□□□ 1.06
SPNS1-203ENST00000334536 SSX2IPQ9Y2D8 614 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 PCDHB2Q9Y5E7 798 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 HNRNPDLO14979 420 aaKnown RBP21.65■■□□□ 1.06
SPNS1-203ENST00000334536 EXTL3O43909 919 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 ITIH2P19823 946 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 CLCN2P51788 898 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 ADARP55265 1226 aaKnown RBP21.65■■□□□ 1.06
SPNS1-203ENST00000334536 PTP4A2Q12974 167 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 SPIDRQ14159 915 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 SGO2Q562F6 1265 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 CPNE8Q86YQ8 564 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 CDHR1Q96JP9 859 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 ARHGAP28Q9P2N2 729 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 ANAPC7Q9UJX3 599 aa21.65■■□□□ 1.06
SPNS1-203ENST00000334536 TBX10O75333 385 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 ZBTB7AO95365 584 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 ASMTLO95671 621 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 DLATP10515 647 aaKnown RBP21.64■■□□□ 1.05
SPNS1-203ENST00000334536 KCNA2P16389 499 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 CCNFP41002 786 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 OAZ1P54368 228 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 PLOD1Q02809 727 aaPredicted RBP21.64■■□□□ 1.05
SPNS1-203ENST00000334536 MTMR2Q13614 643 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 PSMD6Q15008 389 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 TRMT1LQ7Z2T5 733 aaKnown RBP21.64■■□□□ 1.05
SPNS1-203ENST00000334536 GRK7Q8WTQ7 553 aa21.64■■□□□ 1.05
SPNS1-203ENST00000334536 DGCR14Q96DF8 476 aaKnown RBP21.64■■□□□ 1.05
SPNS1-203ENST00000334536 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.64■■□□□ 1.05
SPNS1-203ENST00000334536 GOLGB1Q14789 3259 aaKnown RBP21.64■■□□□ 1.05
SPNS1-203ENST00000334536 CLDN3O15551 220 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 SPATA31D3P0C874 917 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 CRABP2P29373 138 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 SERPINB3P29508 390 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 MLH1P40692 756 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 SLCO1A2P46721 670 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 CAV1Q03135 178 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 GRM2Q14416 872 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 P3H1Q32P28 736 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 WDR44Q5JSH3 913 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 SPATA31D4Q6ZUB0 917 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 NSUN6Q8TEA1 469 aaKnown RBP21.63■■□□□ 1.05
SPNS1-203ENST00000334536 FAM213AQ9BRX8 229 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 LGALS13Q9UHV8 139 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 PTPN22Q9Y2R2 807 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.63■■□□□ 1.05
SPNS1-203ENST00000334536 F8W8V4 182 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 BRAFP15056 766 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 DPEP1P16444 411 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 KCNJ1P48048 391 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 ZNF280AP59817 542 aaPredicted RBP21.63■■□□□ 1.05
SPNS1-203ENST00000334536 PTK6Q13882 451 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 HNRNPDQ14103 355 aaKnown RBP21.63■■□□□ 1.05
SPNS1-203ENST00000334536 ACSBG2Q5FVE4 666 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 CFAP157Q5JU67 520 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 PPP1R2P3Q6NXS1 205 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 TRIM72Q6ZMU5 477 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 PASD1Q8IV76 773 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 MAP7D3Q8IWC1 876 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 ARHGAP24Q8N264 748 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 ATG4CQ96DT6 458 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 MPP4Q96JB8 637 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 KCNK9Q9NPC2 374 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 XPNPEP1Q9NQW7 623 aa21.63■■□□□ 1.05
SPNS1-203ENST00000334536 MYPNQ86TC9 1320 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 STAM2O75886 525 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 KRT36O76013 467 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 SLC18A1P54219 525 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 SWSAP1Q6NVH7 229 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 B3GNT6Q6ZMB0 384 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 PHLDB2Q86SQ0 1253 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 ANKRD42Q8N9B4 389 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 BTBD10Q9BSF8 475 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 CYP26B1Q9NR63 512 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 ZDHHC7Q9NXF8 308 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 STYXL1Q9Y6J8 313 aa21.62■■□□□ 1.05
SPNS1-203ENST00000334536 TPD52L2O43399 206 aaKnown RBP21.62■■□□□ 1.05
SPNS1-203ENST00000334536 LGR5O75473 907 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms